{"id":"W2101141163","doi":"10.1261/rna.027615.111","title":"Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs","year":2012,"lang":"en","type":"article","venue":"RNA","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Ministero della Salute","keywords":"Biology; microRNA; Deep sequencing; Hypoxia (environmental); Gene; Umbilical vein; Computational biology; Genetics; Bioinformatics; Cell biology; Genome; In vitro","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001851424,0.00008196873,0.0001150129,0.00002066434,0.00003071269,0.000004371846,0.0001129618,0.00005523285,0.00001627438],"category_scores_gemma":[0.00004615587,0.0000650992,0.00004977778,0.00004586012,0.0001445558,0.000003106694,0.00008881304,0.00002857416,0.000002583047],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000012958,"about_ca_system_score_gemma":0.00002691628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001948339,"about_ca_topic_score_gemma":0.000008297643,"domain_scores_codex":[0.9994316,0.00003719607,0.0001885972,0.0001174874,0.00007656002,0.0001486023],"domain_scores_gemma":[0.9994899,0.0000146314,0.0001166532,0.0002506316,0.00005967718,0.00006848382],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004090033,0.00003356759,0.0003855549,0.00003442012,0.00002285848,6.7193e-8,0.000151193,0.00001857539,0.9985039,0.000298107,0.0001833506,0.0003275215],"study_design_scores_gemma":[0.0002117721,0.00004078507,0.009875972,0.00001688649,0.00001900413,0.000004303991,0.00004983564,0.0000222519,0.9884673,0.00008223121,0.001138641,0.00007106175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953572,0.000613145,0.003340476,0.00004444888,0.00007251708,0.0001897066,0.00007342916,0.000002663571,0.0003064577],"genre_scores_gemma":[0.9957144,0.00001513655,0.003961217,0.00007869326,0.000136845,0.000004008623,0.00001308292,0.00001060834,0.00006601265],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01003663,"threshold_uncertainty_score":0.2654668,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03539791505950814,"score_gpt":0.2535923414974535,"score_spread":0.2181944264379453,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}