{"id":"W2101544061","doi":"10.1186/1471-2164-13-314","title":"Transposable elements in phytopathogenic Verticillium spp.: insights into genome evolution and inter- and intra-specific diversification","year":2012,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Agriculture; National Science Foundation","keywords":"Biology; Retrotransposon; Genetics; Genome; Transposable element; Verticillium; Mobile genetic elements; ORFS; Gene; Botany; Open reading frame","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001673627,0.0002784852,0.0001907233,0.000844043,0.000171132,0.0003750689,0.0002115474,0.000459612,0.0006185439],"category_scores_gemma":[0.0003049599,0.0001352493,0.0002876494,0.0007511557,0.0001944998,0.0002583931,0.0002641205,0.0004030218,0.0002557549],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001856708,"about_ca_system_score_gemma":0.000145727,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000427289,"about_ca_topic_score_gemma":0.0008083893,"domain_scores_codex":[0.9998817,0.00001241717,0.00001097191,0.00004764496,0.00002636007,0.00002091297],"domain_scores_gemma":[0.9997209,0.00008047243,0.0000871631,0.00002607579,0.00003765,0.00004772574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001591422,0.00003308756,0.02114106,0.000178021,0.0000273326,0.0002215632,0.0002328737,0.0002106975,0.9654866,0.0000857848,0.00001981679,0.01220405],"study_design_scores_gemma":[0.00002997454,0.0007714924,0.8009864,0.0001149645,0.0002478136,0.005170676,0.0008698637,0.002480391,0.1816783,0.0006589314,0.006953424,0.00003778255],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958988,0.001394405,0.001556165,0.00002573811,0.000003790428,0.00001920274,0.0005666102,0.0000217955,0.0005136293],"genre_scores_gemma":[0.9915347,0.001314078,0.003566933,0.00003377073,0.00001129581,0.00002361123,0.002799549,0.00001864243,0.0006974087],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000844043,"threshold_uncertainty_score":0.002069235,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02230281176401249,"score_gpt":0.1987042402636782,"score_spread":0.1764014284996657,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}