{"id":"W2101661998","doi":"10.1186/1471-2148-10-197","title":"Species delineation using Bayesian model-based assignment tests: a case study using Chinese toad-headed agamas (genus Phrynocephalus)","year":2010,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Biology; Mitochondrial DNA; Evolutionary biology; Nuclear DNA; Species complex; Sympatry; Nuclear gene; Reproductive isolation; Clade; Population; Genetics; Phylogenetic tree; Sympatric speciation; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0101875,0.0006673361,0.000722395,0.001738627,0.002800128,0.001303586,0.001915957,0.00149331,0.001075992],"category_scores_gemma":[0.02491783,0.0002511099,0.0007041442,0.001730252,0.001535386,0.001026786,0.001625872,0.001218572,0.0001843868],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001645666,"about_ca_system_score_gemma":0.001229316,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01785544,"about_ca_topic_score_gemma":0.03059033,"domain_scores_codex":[0.9967541,0.001987182,0.0001906898,0.0004435126,0.0004244559,0.0001999985],"domain_scores_gemma":[0.9820025,0.01393977,0.001184949,0.0008605931,0.001473592,0.000538589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004614395,0.000815675,0.78693,0.0004853734,0.0002586918,0.03329026,0.01412693,0.02891013,0.005152251,0.003789858,0.001997343,0.123782],"study_design_scores_gemma":[0.0001417486,0.001373014,0.39516,0.0003089295,0.0004340473,0.01725981,0.02165457,0.5326503,0.00677161,0.01656449,0.007407327,0.0002741232],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9838366,0.0002125364,0.0143525,0.0002640235,0.0000109363,0.0001401555,0.00008853788,0.00003503938,0.001059766],"genre_scores_gemma":[0.9691108,0.0001330888,0.03024834,0.00006284462,0.00001309339,0.00005647147,0.0001682843,0.00002831689,0.0001787056],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01785544,"threshold_uncertainty_score":0.05387723,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03748140764403941,"score_gpt":0.3068844497581024,"score_spread":0.269403042114063,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}