{"id":"W2101754326","doi":"10.1101/gad.251694.114","title":"Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization","year":2014,"lang":"en","type":"article","venue":"Genes & Development","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":250,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Institute of Genetics; Medical Research Council; Canadian Institutes of Health Research","keywords":"Chromosome conformation capture; Biology; Chromatin; Genome; Fluorescence in situ hybridization; Spatial organization; In situ; Locus (genetics); Genetics; Genomic organization; Chromosome; Fish <Actinopterygii>; Evolutionary biology; Computational biology; Gene; Enhancer; Gene expression; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002385393,0.0004912768,0.0006479893,0.003499495,0.0003561244,0.001873448,0.001065123,0.0009822703,0.001130949],"category_scores_gemma":[0.003411362,0.0006199039,0.000584292,0.001470331,0.00183043,0.00157217,0.001421233,0.00187654,0.000520484],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008326485,"about_ca_system_score_gemma":0.0003537609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00144736,"about_ca_topic_score_gemma":0.003151249,"domain_scores_codex":[0.9977202,0.0008391576,0.0001404569,0.000436056,0.000713457,0.0001506223],"domain_scores_gemma":[0.9965748,0.001735677,0.0004488387,0.0005178142,0.0005736706,0.0001492674],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005435232,0.0000274098,0.01021801,0.000924791,0.0001821383,0.0004721173,0.001093012,0.001003197,0.9355384,0.009766529,0.000452452,0.03977839],"study_design_scores_gemma":[0.00006593771,0.0004788311,0.2222132,0.0006460691,0.0005818669,0.01031364,0.004143687,0.008768115,0.6984272,0.02208835,0.03191195,0.0003610761],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"review","genre_scores_codex":[0.4503754,0.05873332,0.4628671,0.00416382,0.0003380991,0.0001131809,0.001968777,0.0007816635,0.02065863],"genre_scores_gemma":[0.8416412,0.02238198,0.1285599,0.001976738,0.0002974624,0.0001921127,0.001963294,0.0004286589,0.002558596],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.003499495,"threshold_uncertainty_score":0.01261532,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004844621998336582,"score_gpt":0.1847536003529578,"score_spread":0.1799089783546212,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}