{"id":"W2101933588","doi":"10.1139/g10-091","title":"Massive alterations of the methylation patterns around DNA transposons in the first four generations of a newly formed wheat allohexaploid","year":2011,"lang":"en","type":"article","venue":"Genome","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Nella and Leon Benoziyo Center for Neurological Diseases, Weizmann Institute of Science","keywords":"Transposable element; DNA methylation; Methylation; Biology; Genetics; Genome; genomic DNA; DNA; Gene; Gene expression","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001190716,0.00007901898,0.0001029159,0.00001344908,0.0002024936,0.00001515633,0.0002692037,0.00004635073,0.0002930918],"category_scores_gemma":[0.00001635384,0.00002609285,0.0001001225,0.0003028408,0.00004156808,0.00007119924,0.00002004634,0.00005987438,0.000003778492],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001422686,"about_ca_system_score_gemma":0.0000163357,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007160068,"about_ca_topic_score_gemma":0.02623326,"domain_scores_codex":[0.9992759,0.00007528457,0.0002583122,0.0001229065,0.0001415063,0.0001260841],"domain_scores_gemma":[0.9996203,0.0001063603,0.0001006182,0.00009559593,0.00005547753,0.00002160597],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001140376,0.0002241957,0.02643145,0.00001117049,0.00002996597,7.322172e-7,0.01039484,0.0004311921,0.9585891,0.003156977,0.00001296479,0.0007060199],"study_design_scores_gemma":[0.0001230414,0.0001156408,0.9888849,0.00001238855,0.00002928794,0.000002706482,0.0007138049,0.000127825,0.006596972,0.002219233,0.001101039,0.00007310733],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946636,0.00004044518,0.0002335626,0.003896757,0.00005208976,0.0003543238,0.0001819343,0.000005854608,0.000571424],"genre_scores_gemma":[0.9994107,0.00001942586,0.0001763343,0.0001707639,0.00007306518,0.0000525613,0.0000406285,7.650342e-7,0.00005575406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9624535,"threshold_uncertainty_score":0.9915354,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04207412323016758,"score_gpt":0.2109131876324984,"score_spread":0.1688390644023308,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}