{"id":"W2102229358","doi":"10.1128/jb.01452-07","title":"Evolution of the Mycobacterial SigK Regulon","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Regulon; Biology; Genetics; Sigma factor; Gene; Promoter; Mycobacterium marinum; Locus (genetics); Regulator; Mycobacterium tuberculosis; Conserved sequence; Regulator gene; Regulatory sequence; Regulation of gene expression; Mycobacterium; Gene expression; Peptide sequence; Tuberculosis; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002945022,0.0001819,0.000143363,0.0005107348,0.000247497,0.0004260314,0.0002044313,0.0002794812,0.0003062072],"category_scores_gemma":[0.000307436,0.0001791726,0.0001865837,0.00033105,0.0002795823,0.0001840841,0.0004778122,0.0003680063,0.0002532051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003722665,"about_ca_system_score_gemma":0.0002268478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009139712,"about_ca_topic_score_gemma":0.0009965707,"domain_scores_codex":[0.9998077,0.00003553637,0.00001291736,0.00005387927,0.00004193326,0.00004811942],"domain_scores_gemma":[0.9998409,0.00003311797,0.00002807993,0.00002660525,0.00004098938,0.00003022373],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001924205,0.00003218835,0.02684082,0.0000607478,0.0000162846,0.0003089427,0.0002277879,0.0003856331,0.9486417,0.0005214469,0.00004557183,0.02272646],"study_design_scores_gemma":[0.00005104462,0.000677747,0.7451881,0.00009134832,0.00009609736,0.003698993,0.0006651352,0.007456457,0.2266807,0.001154631,0.01417086,0.00006898082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970234,0.0005111868,0.0009815322,0.0000656761,0.000004663211,0.000006540406,0.00005414712,0.00002657138,0.001326328],"genre_scores_gemma":[0.9972646,0.0003670734,0.001359885,0.00005149025,0.000003925984,0.000004654488,0.0001944224,0.00001186526,0.0007420626],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009139712,"threshold_uncertainty_score":0.002700925,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02149167303775448,"score_gpt":0.271200987412936,"score_spread":0.2497093143751815,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}