{"id":"W2102254747","doi":"10.1038/ismej.2010.40","title":"Complex array of endobionts in <i>Petalomonas sphagnophila</i>, a large heterotrophic euglenid protist from <i>Sphagnum</i>-dominated peatlands","year":2010,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Japan Society for the Promotion of Science; Nova Scotia Health Research Foundation; Dalhousie University; Canadian Institutes of Health Research; Tula Foundation; Natural Sciences and Engineering Research Council of Canada; Johns Hopkins University; Canadian Institute for Advanced Research","keywords":"Biology; Protist; Ribosomal DNA; 16S ribosomal RNA; Botany; Flagellate; Proteobacteria; Obligate; Sphagnum; Phylogenetics; Ecology; Bacteria; Peat; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004289995,0.0001833608,0.0002433133,0.00005306536,0.0001885384,0.00003710132,0.0005760902,0.000145035,0.0001827636],"category_scores_gemma":[0.00004074173,0.0001383058,0.0001523531,0.0001021377,0.0001562417,0.000009978985,0.000111648,0.0005739324,0.00001392404],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000105558,"about_ca_system_score_gemma":0.00006901387,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006371391,"about_ca_topic_score_gemma":0.0002523332,"domain_scores_codex":[0.9987407,0.0001558281,0.0003331852,0.0002239787,0.0002154801,0.0003308135],"domain_scores_gemma":[0.9991821,0.00002311492,0.0002354218,0.0003530183,0.00009717377,0.0001091591],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002909465,0.0001861754,0.02612783,0.000007990053,0.0000714971,0.00003030716,0.0001668732,0.000008984032,0.97155,0.00002999548,0.001228997,0.0003004244],"study_design_scores_gemma":[0.006235173,0.0007442776,0.2014197,0.00006401367,0.00007778095,0.000509515,0.0001727261,0.00006156426,0.7571009,0.001324611,0.03181918,0.0004705263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974442,0.0003371919,0.0002900026,0.0005323399,0.0003370176,0.0002933786,0.0002038109,0.000005550197,0.0005565631],"genre_scores_gemma":[0.9982424,0.00009599658,0.0005377076,0.0004963222,0.0003382124,0.000009457442,0.0001579727,0.00001686042,0.0001050219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.214449,"threshold_uncertainty_score":0.5639946,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008835160204048276,"score_gpt":0.2287841197372094,"score_spread":0.2199489595331612,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}