{"id":"W2102333718","doi":"10.1111/mpp.12296","title":"Identification of genetic and environmental factors stimulating excision from <scp> <i>S</i> </scp> <i>treptomyces scabiei</i> chromosome of the toxicogenic region responsible for pathogenicity","year":2015,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Pathogenicity island; Streptomyces; Gene; Streptomyces coelicolor; Genetics; Common scab; Microbiology; Genome; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009564703,0.000368028,0.0004152707,0.0002112358,0.00009203751,0.0002901683,0.0001089102,0.0001811407,0.0009353359],"category_scores_gemma":[0.0002006138,0.0001372936,0.0002453676,0.0001605498,0.0001786782,0.0001204627,0.00019334,0.0003461772,0.000371815],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001907264,"about_ca_system_score_gemma":0.000179555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007779418,"about_ca_topic_score_gemma":0.001103501,"domain_scores_codex":[0.9998915,0.00002185792,0.000008875115,0.0000249292,0.00002145597,0.00003140308],"domain_scores_gemma":[0.999788,0.00006295428,0.00004931598,0.0000184514,0.00001907901,0.00006220423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005126263,0.00001488173,0.0002389398,0.00001302777,0.000001540769,0.00002665364,0.000005128969,0.00001278123,0.9993586,0.000008273014,0.000007755918,0.0002611981],"study_design_scores_gemma":[0.00002911972,0.000669217,0.1240228,0.00001698273,0.0000316417,0.0004701609,0.0001603876,0.001229515,0.8716841,0.00004700803,0.001624468,0.00001453043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973441,0.0004132882,0.0008887377,0.00004146128,0.000006949033,0.00002847932,0.0004140068,0.000034516,0.0008285874],"genre_scores_gemma":[0.9956181,0.0002710095,0.001296682,0.00005338651,0.000008012272,0.00003777351,0.001416311,0.00002345102,0.001275322],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009353359,"threshold_uncertainty_score":0.003129065,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01698062240440205,"score_gpt":0.2041476081191876,"score_spread":0.1871669857147855,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}