{"id":"W2102333718","doi":"10.1111/mpp.12296","title":"Identification of genetic and environmental factors stimulating excision from <scp> <i>S</i> </scp> <i>treptomyces scabiei</i> chromosome of the toxicogenic region responsible for pathogenicity","year":2015,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Pathogenicity island; Streptomyces; Gene; Streptomyces coelicolor; Genetics; Common scab; Microbiology; Genome; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001621041,0.0001243123,0.0002048881,0.00001461427,0.00007587758,0.00001107186,0.000188468,0.0001163748,0.000001254157],"category_scores_gemma":[0.0001700496,0.00005613387,0.00009960072,0.00009391378,0.0001156288,0.00003243724,0.00008893917,0.00004805043,5.448454e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001261416,"about_ca_system_score_gemma":0.00001660883,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000010474,"about_ca_topic_score_gemma":0.00003044416,"domain_scores_codex":[0.9988444,0.0001806343,0.0003290303,0.0002833664,0.0001930018,0.0001696066],"domain_scores_gemma":[0.9991515,0.0003573606,0.0002732024,0.0001189318,0.0000258135,0.00007324327],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000343906,0.00005055999,0.02650566,0.000008091521,0.00001085638,0.00001445953,0.0001319571,0.00009127278,0.9724669,0.00001053862,0.00005299526,0.0006223007],"study_design_scores_gemma":[0.0002293852,0.0001665808,0.2127785,0.0000208566,0.00005334194,0.00002556885,0.0003432575,0.0002927159,0.7850426,0.0008087994,0.0001820512,0.00005639869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954173,0.001759099,0.0001883845,0.0000348651,0.00006532753,0.0002959229,0.002222708,0.000009460763,0.000006912673],"genre_scores_gemma":[0.9992638,0.0001140453,0.0001244371,0.00004351176,0.0000241043,0.0000103683,0.0003976664,0.000001918052,0.00002017853],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1874243,"threshold_uncertainty_score":0.2289073,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01698062240440205,"score_gpt":0.2041476081191876,"score_spread":0.1871669857147855,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}