{"id":"W2102353725","doi":"10.1165/rcmb.2013-0015oc","title":"NLRP3 and ASC Differentially Affect the Lung Transcriptome during Pneumococcal Pneumonia","year":2013,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Transcriptome; Pneumonia; Pneumococcal pneumonia; Affect (linguistics); Medicine; Lung; Biology; Streptococcus pneumoniae; Microbiology; Bioinformatics; Immunology; Internal medicine; Genetics; Antibiotics; Psychology; Gene; Communication; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001316806,0.0003202962,0.0005230638,0.0002773844,0.0001691315,0.0003822879,0.0001356952,0.0004003696,0.001101212],"category_scores_gemma":[0.0001721428,0.0001911459,0.0004415266,0.0002510333,0.0003325428,0.000226017,0.0003247784,0.0007211517,0.0003770526],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002355963,"about_ca_system_score_gemma":0.0002167854,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000474594,"about_ca_topic_score_gemma":0.0006028012,"domain_scores_codex":[0.9996426,0.00002961903,0.0000277132,0.0001140061,0.0000903997,0.00009556737],"domain_scores_gemma":[0.9998065,0.00001653925,0.00007850256,0.00001207437,0.00002180567,0.00006459379],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004182256,0.00001233934,0.001200669,0.00004053173,0.00001065549,0.00004844526,0.00002416897,0.00003262916,0.9975548,0.00002514175,0.00003729125,0.0005951021],"study_design_scores_gemma":[0.00007622962,0.001217024,0.5151191,0.00005388767,0.0002216432,0.001408363,0.0006194597,0.001881425,0.474241,0.0003914458,0.00472778,0.00004259911],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937116,0.001694241,0.001121501,0.0001158385,0.00003515091,0.0000217583,0.002683973,0.00005994536,0.0005559549],"genre_scores_gemma":[0.9905725,0.00103445,0.00109909,0.0002813424,0.0000288632,0.00009473242,0.003928988,0.00004967931,0.002910353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001101212,"threshold_uncertainty_score":0.003683984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004307669374768393,"score_gpt":0.2370142681402937,"score_spread":0.2327065987655253,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}