{"id":"W2102375898","doi":"10.1128/iai.01141-07","title":"Flagellin-Dependent and -Independent Inflammatory Responses following Infection by Enteropathogenic<i>Escherichia coli</i>and<i>Citrobacter rodentium</i>","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Children's Hospital","funders":"","keywords":"Citrobacter rodentium; Enteropathogenic Escherichia coli; Biology; Flagellin; TLR5; Microbiology; Proinflammatory cytokine; Type three secretion system; Citrobacter; Intimin; Shigella flexneri; Pathogen; TLR2; Innate immune system; Enterobacteriaceae; Escherichia coli; Immunology; Inflammation; Virulence; Immune system; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005108125,0.000225153,0.0001998945,0.00008007406,0.0006337284,0.00007340511,0.00005862504,0.000170273,0.000007344033],"category_scores_gemma":[0.0001935947,0.0002245704,0.00008133979,0.00009398259,0.0001837575,0.0000353069,0.0003301872,0.0003153799,0.000004060872],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003316356,"about_ca_system_score_gemma":0.00005089425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000496548,"about_ca_topic_score_gemma":0.000267777,"domain_scores_codex":[0.9985473,0.0004132174,0.0002403859,0.0003479144,0.0001824946,0.0002686689],"domain_scores_gemma":[0.9994146,0.00004101139,0.00008787405,0.0002356362,0.00008697401,0.0001339195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001470623,0.00007131388,0.3088707,0.00002766695,0.0001011422,0.000006336861,0.0001501152,0.000001646044,0.6899117,0.000003406903,0.0002424745,0.0004664384],"study_design_scores_gemma":[0.001633759,0.0005559825,0.8626853,0.00002846436,0.0000562197,0.0001431221,0.0000677736,0.0000476491,0.1084951,0.00002212998,0.02586689,0.000397691],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964598,0.002066664,0.000601292,0.00004426538,0.0002211577,0.0002658716,0.0000107932,0.00004089232,0.0002892741],"genre_scores_gemma":[0.9838253,0.01485126,0.00005567227,0.0001848606,0.00007468058,0.00005243008,0.00002579769,0.00002318855,0.0009067837],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5814167,"threshold_uncertainty_score":0.9157717,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.011572114319585,"score_gpt":0.2466289249014932,"score_spread":0.2350568105819082,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}