{"id":"W2102423239","doi":"10.1158/1055-9965.epi-11-1123-t","title":"Association of the 15q25 and 5p15 Lung Cancer Susceptibility Regions with Gene Expression in Lung Tumor Tissue","year":2012,"lang":"en","type":"article","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; Lunenfeld-Tanenbaum Research Institute; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Lung cancer; Locus (genetics); Genome-wide association study; Biology; Adenocarcinoma; Genotype; Gene; Lung cancer susceptibility; Genetics; Lung; Allele; Oncology; Bioinformatics; Cancer; Pathology; Internal medicine; Medicine; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001107873,0.0001333073,0.0002243913,0.00003504154,0.00009464274,0.000003412631,0.0001069144,0.000172411,0.00004486517],"category_scores_gemma":[0.0001649173,0.00009753787,0.00006471122,0.00009914315,0.0001072399,0.00001785463,0.00009142824,0.00008905015,2.639196e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001636378,"about_ca_system_score_gemma":0.0001062956,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004480175,"about_ca_topic_score_gemma":0.001360088,"domain_scores_codex":[0.9984055,0.0005970916,0.0003643001,0.0002689251,0.00006617648,0.0002980028],"domain_scores_gemma":[0.9991289,0.000070277,0.0004220893,0.0002535163,0.00006978543,0.00005547339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007234068,0.00004021165,0.8695245,0.00005657885,0.0001121564,8.200926e-8,0.000107744,0.00006425915,0.127503,0.00005037777,0.002203646,0.0002650951],"study_design_scores_gemma":[0.0005864485,0.00004802848,0.9130355,0.0001381814,0.0001140949,0.000004620696,0.0001136459,0.00008842571,0.08412825,0.0002107414,0.001385693,0.0001463996],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9843632,0.01236539,0.001406536,0.001083784,0.0003003539,0.0003849226,0.00003914384,0.000005763765,0.00005092948],"genre_scores_gemma":[0.9967995,0.0008709237,0.001084544,0.0001216229,0.000153124,0.000178955,0.00005469676,0.00001145781,0.0007252098],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04351096,"threshold_uncertainty_score":0.3977479,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01539757514145161,"score_gpt":0.3050744173900232,"score_spread":0.2896768422485715,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}