{"id":"W2102460294","doi":"10.1093/nar/gkl820","title":"Self-splicing of a group IIC intron: 5′ exon recognition and alternative 5′ splicing events implicate the stem–loop motif of a transcriptional terminator","year":2006,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale","keywords":"Group II intron; Intron; Biology; Exon; RNA splicing; Ribozyme; Terminator (solar); Minigene; Genetics; Group I catalytic intron; Alternative splicing; Exon shuffling; Splice site mutation; Gene; Splicing factor; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002127705,0.0002314365,0.000175795,0.0001516269,0.0001501273,0.0003805662,0.0001577788,0.0003391067,0.0006219678],"category_scores_gemma":[0.0002478026,0.0001218054,0.000264531,0.0001362913,0.0002312254,0.0001426794,0.0001471291,0.0004353325,0.0003538885],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002187489,"about_ca_system_score_gemma":0.0002057114,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002471445,"about_ca_topic_score_gemma":0.0003121878,"domain_scores_codex":[0.9998171,0.00002185787,0.0000112236,0.00005600981,0.00005921482,0.00003468004],"domain_scores_gemma":[0.9996616,0.00007244966,0.0000933312,0.00005996741,0.00005098603,0.00006173095],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003116583,0.00001395141,0.001417765,0.00001719269,0.000002955536,0.0001217164,0.00003569277,0.00004376232,0.9962726,0.0003170223,0.00001650413,0.001709778],"study_design_scores_gemma":[0.000007831537,0.0001099486,0.01406975,0.000008871409,0.00001565811,0.0009123997,0.00004753831,0.001012127,0.9815492,0.0001761149,0.002084715,0.000005833101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930709,0.0004363756,0.005055627,0.00003792518,0.00001265886,0.00001181168,0.00007160512,0.0000314435,0.001271709],"genre_scores_gemma":[0.9897348,0.0001481757,0.008064966,0.00004732008,0.000009699756,0.00001373808,0.0006236531,0.00002018784,0.001337592],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006219678,"threshold_uncertainty_score":0.002080739,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04057600275741934,"score_gpt":0.2955241975824766,"score_spread":0.2549481948250572,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}