{"id":"W2102502325","doi":"10.1093/nar/gkq538","title":"ZOOM Lite: next-generation sequencing data mapping and visualization software","year":2010,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo; Bioinformatics Solutions (Canada)","funders":"","keywords":"Zoom; Software; Visualization; Computer science; Pipeline (software); Usability; Software visualization; File format; Data mining; Computer graphics (images); Database; Software development; Biology; Software construction; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002480432,0.001461819,0.001410653,0.003746517,0.0008373153,0.001513776,0.002477817,0.001351602,0.04591482],"category_scores_gemma":[0.004224669,0.001413939,0.001151443,0.002096272,0.0004600002,0.002774578,0.002439739,0.002151863,0.01519074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006304919,"about_ca_system_score_gemma":0.001104964,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001629956,"about_ca_topic_score_gemma":0.00221114,"domain_scores_codex":[0.9991302,0.0001621425,0.00009521571,0.0001626833,0.000370412,0.00007942925],"domain_scores_gemma":[0.9984908,0.0006918846,0.0001284337,0.0002294257,0.0003219941,0.0001374241],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000906999,0.0001275893,0.002037611,0.002134407,0.0002702533,0.0006426978,0.0007026892,0.003067633,0.07946108,0.00512208,0.4993727,0.4061542],"study_design_scores_gemma":[0.000627953,0.0002683476,0.009919683,0.0005862056,0.000206205,0.002814486,0.0002267411,0.1050997,0.1447903,0.02457134,0.7101756,0.0007133961],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.005114209,0.001000861,0.563178,0.0004183277,0.0002767431,0.0003384947,0.01697883,0.4075557,0.005138894],"genre_scores_gemma":[0.0252676,0.0008629916,0.8819885,0.0009350334,0.0001341998,0.001570969,0.03502445,0.04499741,0.0092189],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.04591482,"threshold_uncertainty_score":0.1536004,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1618913157626431,"score_gpt":0.3626972678280431,"score_spread":0.2008059520653999,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}