{"id":"W2102799813","doi":"10.1007/s12526-009-0014-7","title":"Phylogenetic position and description of Rhytidocystis cyamus sp. n. (Apicomplexa, Rhytidocystidae): a novel intestinal parasite of the north-eastern Pacific ‘stink worm’ (Polychaeta, Opheliidae, Travisia pupa)","year":2009,"lang":"en","type":"article","venue":"Marine Biodiversity","topic":"Marine Biology and Ecology Research","field":"Earth and Planetary Sciences","cited_by":18,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Tula Foundation; Canadian Institute for Advanced Research","keywords":"Biology; Clade; Phylogenetic tree; Parasite hosting; Apicomplexa; Phylogenetics; Zoology; Botany; Gene; Plasmodium falciparum; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002445299,0.0001891533,0.0002989142,0.0001279004,0.0002690743,0.00002077687,0.0003259388,0.0001208138,0.0008413714],"category_scores_gemma":[0.00005039165,0.0001482167,0.00008957248,0.0003135356,0.0004840727,0.0001231409,0.0001285231,0.0002286076,0.00005905328],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001145663,"about_ca_system_score_gemma":0.00004370064,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003242205,"about_ca_topic_score_gemma":0.003241529,"domain_scores_codex":[0.9986979,0.0001212843,0.0002874998,0.0003398141,0.000216689,0.0003368617],"domain_scores_gemma":[0.9992162,0.00008751238,0.0002081565,0.0002622117,0.000107678,0.00011827],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004759903,0.00007649876,0.9866534,0.00003890339,0.00002867019,0.000009593856,0.00009642742,0.00003796697,0.000768176,0.00001210382,0.0001119591,0.01169035],"study_design_scores_gemma":[0.0006631191,0.0005955445,0.9970157,0.00001830428,0.00004878665,0.0001127432,0.00006054352,0.0009205422,0.0002172534,0.0001265592,0.00007534508,0.0001455631],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971645,0.0001045345,0.00004776544,0.0002933165,0.0001619576,0.0002759656,0.0001781108,0.00001491142,0.001758933],"genre_scores_gemma":[0.9988414,0.00004158279,0.0005719873,0.00007080507,0.00003490516,5.653876e-7,0.0001719506,0.000001408878,0.0002653649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01154478,"threshold_uncertainty_score":0.9212427,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02289740942345863,"score_gpt":0.2060589228766419,"score_spread":0.1831615134531832,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}