{"id":"W2102867860","doi":"10.1371/journal.pone.0033299","title":"Both TLR2 and TRIF Contribute to Interferon-β Production during Listeria Infection","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"Trinity College","funders":"Irish Research Council for Science, Engineering and Technology; Irish Research Council; Institut National de la Recherche Agronomique; Institut National de la Santé et de la Recherche Médicale; Science Foundation Ireland; Howard Hughes Medical Institute","keywords":"TRIF; IRF3; TLR2; Biology; Listeria monocytogenes; Innate immune system; Microbiology; Peptidoglycan; Interferon; Immune system; Toll-like receptor; Immunology; Gene; Bacteria; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002431756,0.00008810081,0.0001539109,0.0001032688,0.0001300657,0.00001413094,0.00003109651,0.000104646,0.0001194972],"category_scores_gemma":[0.0001845007,0.00008443693,0.00001916218,0.00007129517,0.00002830926,0.0002803543,0.00004693019,0.000115196,0.0004217706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004605776,"about_ca_system_score_gemma":0.000007675347,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003950386,"about_ca_topic_score_gemma":0.000007733498,"domain_scores_codex":[0.9993373,0.0001189345,0.0001682236,0.0001263347,0.00002320324,0.0002260006],"domain_scores_gemma":[0.9997184,0.00002156165,0.00005868276,0.0001355469,0.00004537395,0.00002040504],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006454187,0.0002374975,0.007019408,0.00004568916,0.0001374645,1.396455e-7,0.0006568665,2.519484e-7,0.9902328,0.00004885969,0.0001642522,0.0008113429],"study_design_scores_gemma":[0.0004412039,0.0001315552,0.1885393,0.00008364605,0.00005098236,0.00001699317,0.00002274329,5.280237e-7,0.8086647,0.000004487292,0.001957241,0.000086557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997804,0.0008106448,0.00004872906,0.0003983239,0.0004066848,0.0003150512,0.000002479007,0.00007265618,0.0001414141],"genre_scores_gemma":[0.9964237,0.0001311572,0.00003935564,0.00003663728,0.0001447863,0.00004019364,0.0000326728,0.000009391532,0.003142154],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1815681,"threshold_uncertainty_score":0.5421149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02572359208102618,"score_gpt":0.2239368697985723,"score_spread":0.1982132777175462,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}