{"id":"W2102882830","doi":"10.1371/journal.pone.0141475","title":"Piscine Reovirus: Genomic and Molecular Phylogenetic Analysis from Farmed and Wild Salmonids Collected on the Canada/US Pacific Coast","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver Island University; BC Centre for Aquatic Health Sciences","funders":"","keywords":"Phylogenetic tree; Biology; Sequence analysis; Phylogenetics; Sequence (biology); Norwegian; Genetics; Evolutionary biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001340418,0.0002210015,0.0002033624,0.001369528,0.0009269714,0.0004604027,0.0001833928,0.0002369227,0.0006100665],"category_scores_gemma":[0.0003087543,0.0001581799,0.0002565506,0.001474697,0.0003858756,0.0001163078,0.0002969039,0.0002504056,0.0001901691],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00146659,"about_ca_system_score_gemma":0.001603062,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.3611433,"about_ca_topic_score_gemma":0.5678145,"domain_scores_codex":[0.9998246,0.000008003413,0.00001156249,0.00005792205,0.00005478847,0.00004308306],"domain_scores_gemma":[0.9996614,0.00002351975,0.00005738579,0.000009821991,0.0001683044,0.00007948194],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002720335,0.00005155487,0.8360254,0.00009221642,0.00007548322,0.0004439231,0.001890379,0.0001524189,0.1506928,0.00004600374,0.0002852143,0.00997257],"study_design_scores_gemma":[0.000002179367,0.00004116052,0.9974922,0.000005402577,0.0000120933,0.0001517374,0.0006658006,0.00007216976,0.000917315,0.000003580495,0.0006334812,0.000003003622],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982705,0.0001075861,0.0001036812,0.00001384549,0.000002437239,0.00001716413,0.001036008,0.000003080128,0.0004456871],"genre_scores_gemma":[0.9905439,0.0002987275,0.001160881,0.00007006265,0.000004720381,0.00003918235,0.006852791,0.000006164305,0.001023669],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6388568,"threshold_uncertainty_score":0.7180823,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04511547201076668,"score_gpt":0.2454165803551819,"score_spread":0.2003011083444152,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}