{"id":"W2102883600","doi":"10.1128/jb.01602-07","title":"Regulation of Expression and Secretion of NleH, a New Non-Locus of Enterocyte Effacement-Encoded Effector in <i>Citrobacter rodentium</i>","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Howard Hughes Medical Institute","keywords":"Citrobacter rodentium; Biology; Effector; Shigella flexneri; Enteropathogenic Escherichia coli; Type three secretion system; Secretion; Citrobacter; Pathogenicity island; Microbiology; Escherichia coli; Virulence; Mutant; Enterobacteriaceae; Gene; Genetics; Cell biology; Pathogen; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001438618,0.0002888985,0.0001548623,0.0001192217,0.00009069639,0.0002716139,0.000169227,0.0001819295,0.000282473],"category_scores_gemma":[0.0001719051,0.00009900147,0.0001945946,0.00007106032,0.0002327509,0.0001596508,0.0002354088,0.0003198561,0.0001633279],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003372469,"about_ca_system_score_gemma":0.0001412494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006439586,"about_ca_topic_score_gemma":0.0005709112,"domain_scores_codex":[0.999815,0.00002707187,0.00002399176,0.00004692786,0.00004455413,0.00004244134],"domain_scores_gemma":[0.999786,0.00004133243,0.00007457647,0.00002820047,0.00003385289,0.00003603319],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003770839,0.00001052823,0.0001834086,0.0000138779,0.000001052933,0.00002499544,0.000009626838,0.00001834837,0.9993099,0.00002156432,0.00001084316,0.0003580804],"study_design_scores_gemma":[0.000007857891,0.0001258128,0.01344641,0.000003447313,0.000005984482,0.000226285,0.00004468395,0.0008331626,0.984301,0.0000254485,0.0009743742,0.000005407055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976846,0.0004413276,0.00110929,0.00004461176,0.00001058793,0.00001309875,0.0002108471,0.00004814035,0.000437481],"genre_scores_gemma":[0.9964566,0.0001930407,0.001520212,0.00003973705,0.000003504781,0.00001499972,0.0006551194,0.00001847356,0.001098342],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006439586,"threshold_uncertainty_score":0.00244689,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01004299514094593,"score_gpt":0.252928586822206,"score_spread":0.2428855916812601,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}