{"id":"W2102946179","doi":"10.1186/1759-8753-3-4","title":"Copy number variation of ribosomal DNA and Pokey transposons in natural populations of Daphnia","year":2012,"lang":"en","type":"article","venue":"Mobile DNA","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Biology; Transposable element; Retrotransposon; Daphnia pulex; Genetics; Genome; Ribosomal DNA; Ribosomal RNA; 18S ribosomal RNA; 28S ribosomal RNA; Gene; genomic DNA; Evolutionary biology; Phylogenetics; RNA; Daphnia; Zoology; Ribosome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002627782,0.0001627414,0.0002025819,0.0007775064,0.0002285073,0.0003372094,0.0003220497,0.0002661085,0.00074583],"category_scores_gemma":[0.0006813834,0.0002175747,0.0001493466,0.000373853,0.0005755161,0.0001948561,0.0002836456,0.00026405,0.0001872878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005370539,"about_ca_system_score_gemma":0.0001086347,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001620748,"about_ca_topic_score_gemma":0.004242264,"domain_scores_codex":[0.9995692,0.00004896774,0.00003040407,0.0002434014,0.00007596014,0.00003206585],"domain_scores_gemma":[0.9992235,0.0002730533,0.0002495716,0.00007145377,0.0001192093,0.00006318295],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003332547,0.00007769986,0.3872136,0.00007839131,0.00009904771,0.00009216208,0.0006986925,0.0005005242,0.6043003,0.000145517,0.00008032336,0.006380457],"study_design_scores_gemma":[0.000006184732,0.0001545947,0.9868864,0.000004008662,0.00002757683,0.000197419,0.0002623925,0.0004812273,0.01152994,0.00004542468,0.0003960834,0.00000878555],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988987,0.00005650029,0.000389467,0.000004231771,0.000001337604,0.00000650226,0.0003713059,0.000009137357,0.0002628055],"genre_scores_gemma":[0.9984554,0.00003035247,0.0007426809,0.00001409237,0.000001793524,0.00002767084,0.0004814409,0.000004361909,0.0002421026],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001620748,"threshold_uncertainty_score":0.003896594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006925016378998596,"score_gpt":0.2596781746887155,"score_spread":0.2527531583097169,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}