{"id":"W2103147240","doi":"10.1093/molbev/msp145","title":"Genes within Genes: Multiple LAGLIDADG Homing Endonucleases Target the Ribosomal Protein S3 Gene Encoded within an rnl Group I Intron of Ophiostoma and Related Taxa","year":2009,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Homing endonuclease; Gene; Genetics; Intron; Ribosomal protein; Coding region; Molecular biology; RNA; Ribosome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003715889,0.000156186,0.0001630753,0.00004715557,0.0002680979,0.00000991446,0.0001418288,0.0001873809,0.0000394926],"category_scores_gemma":[0.00006051577,0.0001189989,0.00003017322,0.0001343756,0.0005069103,0.0001209028,0.0001211742,0.0001248308,0.000006906336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004208614,"about_ca_system_score_gemma":0.00000824723,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003156879,"about_ca_topic_score_gemma":0.0002938704,"domain_scores_codex":[0.9988231,0.0002693736,0.0002512203,0.0003536383,0.00007441557,0.0002282639],"domain_scores_gemma":[0.9995439,0.00001954865,0.0001664204,0.0002021982,0.000008939503,0.00005896606],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001588575,0.0001075949,0.03841877,0.000007023621,0.00003254563,0.00001670927,0.0003970865,0.001952591,0.9508442,0.006559286,0.000012027,0.001493312],"study_design_scores_gemma":[0.001980511,0.002824382,0.7220725,0.00002865402,0.0001066528,0.0001649771,0.000433422,0.03148874,0.204959,0.03522534,0.0002082543,0.0005075693],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948609,0.001002283,0.003284306,0.0001640456,0.00008619168,0.0004791626,0.000007892409,0.00003524913,0.00007994779],"genre_scores_gemma":[0.9953483,0.00003093518,0.004340944,0.0001609742,0.00001609945,0.00003167317,0.00003741232,0.000007995445,0.00002568072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7458852,"threshold_uncertainty_score":0.4852633,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004018063789430234,"score_gpt":0.2000436918162083,"score_spread":0.1960256280267781,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}