{"id":"W2103230271","doi":"10.1371/journal.pone.0071243","title":"Genome Sequencing and Analysis of BCG Vaccine Strains","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Tuberculosis; Mycobacterium tuberculosis; Epitope; Genome; BCG vaccine; Biology; Tuberculosis vaccines; Virology; Population; Vaccination; Virulence; Genetics; Gene; Medicine; Antibody","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008613613,0.00006911817,0.0002727156,0.000245269,0.00006925766,0.000007147198,0.00007343464,0.00007520969,0.002489981],"category_scores_gemma":[0.00005638532,0.00006135425,0.00005324969,0.0002842572,0.00002261918,0.00006375807,0.00004118081,0.00008651576,0.00009093082],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001933118,"about_ca_system_score_gemma":0.00002072242,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00019631,"about_ca_topic_score_gemma":0.00002443033,"domain_scores_codex":[0.9994761,0.00005800923,0.0001857198,0.0001164467,0.00002012674,0.0001435961],"domain_scores_gemma":[0.9995794,0.00007088101,0.00007191117,0.0001717194,0.00009447325,0.00001157072],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001022783,0.000166266,0.006950933,0.00001512683,0.003018459,3.018175e-7,0.0002893822,0.000003674526,0.9888855,0.0002425974,0.00001249294,0.0004050809],"study_design_scores_gemma":[0.0005225661,0.000118077,0.9050176,0.00001706101,0.001551448,0.000002677016,0.0003033394,0.0001457274,0.09207201,0.00006875619,0.00007503217,0.0001057343],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973091,0.001778814,0.0000549691,0.0002378341,0.00001101335,0.000135853,0.00003207708,0.00002014094,0.0004201876],"genre_scores_gemma":[0.9971666,0.0001728145,0.0002335079,0.00003372897,0.00000477482,0.00001282023,0.00008722855,0.000005638879,0.002282937],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8980666,"threshold_uncertainty_score":0.9984219,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03284033664875512,"score_gpt":0.2316519903825646,"score_spread":0.1988116537338095,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}