{"id":"W2103230271","doi":"10.1371/journal.pone.0071243","title":"Genome Sequencing and Analysis of BCG Vaccine Strains","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Tuberculosis; Mycobacterium tuberculosis; Epitope; Genome; BCG vaccine; Biology; Tuberculosis vaccines; Virology; Population; Vaccination; Virulence; Genetics; Gene; Medicine; Antibody","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004876583,0.0004775961,0.0004873419,0.001276956,0.0003442165,0.0004071194,0.0003882374,0.0004743628,0.001136828],"category_scores_gemma":[0.001064588,0.0001791952,0.0009361415,0.001787162,0.0002011111,0.0001894067,0.0003446749,0.0007365173,0.001205991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003270292,"about_ca_system_score_gemma":0.0005297367,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001898346,"about_ca_topic_score_gemma":0.001859738,"domain_scores_codex":[0.9995857,0.00005632001,0.00004704887,0.0001250043,0.0001261059,0.00005989336],"domain_scores_gemma":[0.9993657,0.0001201835,0.0001566329,0.00007996601,0.0002088978,0.00006863098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007401197,0.00016592,0.01501396,0.0008109754,0.0001167246,0.0004686535,0.0003058461,0.0007929393,0.9473054,0.0005811895,0.001580731,0.03211747],"study_design_scores_gemma":[0.0001957002,0.001541245,0.3486205,0.0003120357,0.0009140555,0.00351027,0.0006545313,0.009157924,0.5146845,0.001493522,0.1188141,0.0001015513],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8935428,0.005646074,0.03694262,0.0005728916,0.0002549786,0.0004514329,0.05604698,0.0005384051,0.006003775],"genre_scores_gemma":[0.7389357,0.003262282,0.07729787,0.0006256471,0.0001045033,0.000388558,0.1747318,0.0004964772,0.004157211],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001898346,"threshold_uncertainty_score":0.003803134,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03284033664875512,"score_gpt":0.2316519903825646,"score_spread":0.1988116537338095,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}