{"id":"W2103277752","doi":"10.1016/j.ydbio.2008.10.004","title":"A novel conserved evx1 enhancer links spinal interneuron morphology and cis-regulation from fish to mammals","year":2008,"lang":"en","type":"article","venue":"Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University; Montreal Clinical Research Institute; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Enhancer; Biology; Zebrafish; Interneuron; Homeobox; Conserved sequence; Transcription factor; Gene; Genetics; Cell biology; Neuroscience; Base sequence; Inhibitory postsynaptic potential","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001291005,0.0002665817,0.0002623366,0.00009609365,0.0001648457,0.00000956137,0.0001813563,0.0005656692,0.000141198],"category_scores_gemma":[0.00006318716,0.0002623337,0.00005129142,0.0001029718,0.0002818615,0.000008274312,0.0003205804,0.0001476809,0.0000880836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004404138,"about_ca_system_score_gemma":0.0001114706,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008795134,"about_ca_topic_score_gemma":0.0002005389,"domain_scores_codex":[0.9984261,0.00008248608,0.0003684536,0.0007092665,0.00006713821,0.0003465126],"domain_scores_gemma":[0.9995111,0.00002300747,0.0001027849,0.0001678297,0.00006160443,0.0001336866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005189754,0.0000458363,0.04771547,0.000003705021,0.00007602664,0.000006292912,0.0001256345,0.000002091037,0.9442422,0.00003442571,0.00104686,0.006182471],"study_design_scores_gemma":[0.0007600959,0.0004064683,0.4178698,0.00001237045,0.000007315475,0.0003059378,0.00003513776,0.000006753332,0.5650653,0.00009571733,0.01513282,0.0003021991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940195,0.0001857769,0.003926237,0.0007327499,0.0003937988,0.0002874091,0.00008574343,0.00002773577,0.0003410387],"genre_scores_gemma":[0.9847641,0.0001133535,0.01002053,0.002746353,0.0001472918,0.00005854774,0.001470436,0.00002033337,0.000659072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3791769,"threshold_uncertainty_score":0.9999829,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01952746154070414,"score_gpt":0.2535804645696549,"score_spread":0.2340530030289507,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}