{"id":"W2103338510","doi":"10.1139/g2012-057","title":"Multiple and different genomic rearrangements of the<i>rbc</i>L gene are present in the parasitic orchid<i>Neottia nidus-avis</i>","year":2012,"lang":"en","type":"article","venue":"Genome","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Pseudogene; Biology; Plastid; Genome; Gene; Genetics; Botany; Chloroplast","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001733512,0.0001168924,0.0001534236,0.000007370169,0.0001341321,0.00002179168,0.0003232104,0.00004507474,0.00002811301],"category_scores_gemma":[0.00001250211,0.00003320018,0.00005269991,0.0001150476,0.00007535476,0.00004927572,0.00007084004,0.00009243916,0.000009661219],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001438421,"about_ca_system_score_gemma":0.000002371215,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001393402,"about_ca_topic_score_gemma":0.0005499698,"domain_scores_codex":[0.9990398,0.000138213,0.0001737677,0.0001585662,0.0001768375,0.0003127712],"domain_scores_gemma":[0.9995752,0.0001613266,0.00009505251,0.0001005387,0.00000989762,0.00005800858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001660533,0.0000999439,0.3681095,0.00001065553,0.000008535693,0.000002342321,0.0002522601,0.000004577998,0.6308572,0.00001995465,0.00006847379,0.0005499891],"study_design_scores_gemma":[0.0001435518,0.00002408923,0.9918743,0.00001555728,0.00001151032,0.000009154176,0.0001802849,0.000004691129,0.002483331,0.00005076747,0.005114624,0.00008815246],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958806,0.002581026,7.373094e-7,0.0006910903,0.00009735924,0.0003177228,0.0001884878,0.000007607994,0.0002353505],"genre_scores_gemma":[0.9991612,0.000234108,0.000008432395,0.0002031486,0.0001816331,0.00002119463,0.00002694099,9.684782e-7,0.000162344],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6283739,"threshold_uncertainty_score":0.1353864,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01853414957019243,"score_gpt":0.2051541779633927,"score_spread":0.1866200283932003,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}