{"id":"W2103358397","doi":"10.1017/s0953756204000206","title":"The phylogenetic position of Spathulospora based on DNA sequences from dried herbarium material","year":2004,"lang":"en","type":"article","venue":"Mycological Research","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Herbarium; Phylogenetic tree; Ascospore; Biology; Ascomycota; Maximum parsimony; Botany; Genus; Phylogenetics; Evolutionary biology; Zoology; Clade; Genetics; Gene; Spore","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004371531,0.00009868461,0.0001131626,0.00003055948,0.0002027191,0.00004360962,0.0002941927,0.0001583383,0.00009893849],"category_scores_gemma":[0.0003317853,0.0000619078,0.00007270723,0.0001138671,0.0003144821,0.000001538164,0.00009266292,0.0001181279,0.00002734379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002605325,"about_ca_system_score_gemma":0.0001537407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000742269,"about_ca_topic_score_gemma":0.00003301915,"domain_scores_codex":[0.998584,0.0002574988,0.0001606905,0.000300215,0.0003789336,0.0003186191],"domain_scores_gemma":[0.999317,0.0001415157,0.00003997371,0.0002728139,0.0001289442,0.00009970019],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008984503,0.000161844,0.0005355889,0.000005833797,0.00001162702,0.00003472076,0.000003594013,0.0003163746,0.997219,0.0002959339,0.000229218,0.0002877757],"study_design_scores_gemma":[0.0005705354,0.002321851,0.1924562,0.000029889,0.0000102615,0.000002336373,0.00004932889,0.0001224527,0.7993869,0.003193029,0.001722451,0.0001348545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973779,0.0002344312,0.00008647147,0.0001822482,0.00008030586,0.0002254726,0.0007525609,0.000007291424,0.001053362],"genre_scores_gemma":[0.9988809,0.0001580894,0.0001590805,0.0001535694,0.000177307,0.00004096419,0.0003787769,0.000007439811,0.00004387302],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1978322,"threshold_uncertainty_score":0.2524527,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03361650204621447,"score_gpt":0.3098211939956448,"score_spread":0.2762046919494304,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}