{"id":"W2103392178","doi":"10.1534/genetics.107.075523","title":"Molecular Genetic Analysis of Two Loci (<i>Ity2</i>and<i>Ity3</i>) Involved in the Host Response to Infection With Salmonella Typhimurium Using Congenic Mice and Expression Profiling","year":2007,"lang":"en","type":"article","venue":"Genetics","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University; Howard Hughes Medical Institute","keywords":"Biology; Congenic; Quantitative trait locus; Genetics; Candidate gene; Locus (genetics); Gene; Salmonella; Gene expression profiling; Phenotype; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005714477,0.0001563771,0.0002227159,0.0003084046,0.00008839547,0.00001774611,0.0001064391,0.0001099447,0.000007189114],"category_scores_gemma":[0.00002542203,0.0001163219,0.00004761193,0.0006277355,0.0001359139,0.00002114037,0.0001113179,0.0001280202,0.000002893843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002067667,"about_ca_system_score_gemma":0.00002147778,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009538724,"about_ca_topic_score_gemma":0.0004711662,"domain_scores_codex":[0.9989058,0.0002817112,0.0002466892,0.0002785606,0.00004664728,0.0002405912],"domain_scores_gemma":[0.999487,0.00007970457,0.0001048058,0.0002327863,0.00006831224,0.00002734516],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007393037,0.00005177388,0.0561709,0.00002092067,0.0002503008,0.00001075321,0.0008733544,0.000876271,0.9408486,0.00001558196,0.0000164422,0.0001258176],"study_design_scores_gemma":[0.001433502,0.0002459586,0.2713129,0.00004213482,0.001466126,0.00001582863,0.0008503235,0.0001413848,0.723498,0.00001530743,0.0007198487,0.0002586832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992202,0.003069296,0.004168223,0.00004402763,0.00003583616,0.0004305868,0.00001248554,0.00001138949,0.00002614285],"genre_scores_gemma":[0.9979018,0.00008398161,0.001688482,0.0002356963,0.000008313722,0.000005125043,0.00003707291,0.00001190235,0.00002763259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2173506,"threshold_uncertainty_score":0.4743468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01069366386266924,"score_gpt":0.2564458195883985,"score_spread":0.2457521557257292,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}