{"id":"W2103473048","doi":"10.1101/gad.1559607","title":"Regulation of plant innate immunity by three proteins in a complex conserved across the plant and animal kingdoms","year":2007,"lang":"en","type":"article","venue":"Genes & Development","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":164,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"British Columbia Knowledge Development Fund; Natural Sciences and Engineering Research Council of Canada; College of Engineering, Michigan State University; Michigan State University","keywords":"Biology; Innate immune system; Arabidopsis; Plant Immunity; Multicellular organism; Immunity; Genetics; Cell biology; Function (biology); Genetic screen; Conserved sequence; Gene; Mutant; Receptor; Immune system; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006303781,0.00009965397,0.0001280209,0.00001081678,0.0002922956,0.00003277493,0.0001587141,0.00005120375,0.00004124614],"category_scores_gemma":[0.00001336341,0.00003753517,0.00001872477,0.000142703,0.00007935121,0.00005755294,0.0001246028,0.0001095597,0.000002460776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003259121,"about_ca_system_score_gemma":0.00001298582,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002642598,"about_ca_topic_score_gemma":0.02586932,"domain_scores_codex":[0.9992002,0.00005139754,0.0003019339,0.0001211879,0.0001067669,0.0002184969],"domain_scores_gemma":[0.9996471,0.0001224507,0.0001178546,0.00004790166,0.00003518654,0.00002946318],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001538702,0.00006997994,0.02654979,0.000005671005,0.00001244918,0.000001599901,0.0005435128,6.823554e-7,0.9470828,0.00003128601,0.0001479273,0.02540042],"study_design_scores_gemma":[0.0001321934,0.00005485989,0.8518395,0.00002871785,0.000001498189,0.00002454563,0.0005446325,0.00003591955,0.1161053,0.00002981966,0.03111468,0.00008832242],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989963,0.0001767746,0.00001860697,0.000259853,0.00003139359,0.0002694156,0.0001893047,0.00001238034,0.00004594425],"genre_scores_gemma":[0.9992411,0.00004035298,0.0002325973,0.00006191205,0.00001174721,0.00001156682,0.0003818885,6.480691e-7,0.00001822689],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8309775,"threshold_uncertainty_score":0.991906,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04691076992729312,"score_gpt":0.2466688646369953,"score_spread":0.1997580947097022,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}