{"id":"W2103722949","doi":"10.1109/cbms.2006.60","title":"BioFOSS: a survey of Free/Open Source Software in Bioinformatic","year":2006,"lang":"en","type":"article","venue":"","topic":"Scientific Computing and Data Management","field":"Decision Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"","keywords":"Open source; Open source software; Computer science; Software; Software engineering; Data science; World Wide Web; Bioinformatics; Operating system; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["open_science"],"consensus_categories":[],"category_scores_codex":[0.008641846,0.0009497608,0.0007647495,0.02659597,0.0008282851,0.003068827,0.001604771,0.00121295,0.003904094],"category_scores_gemma":[0.02546497,0.0007121422,0.0007450737,0.02689201,0.0009210215,0.007149793,0.002209664,0.001334267,0.002482795],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001119214,"about_ca_system_score_gemma":0.002164324,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002310538,"about_ca_topic_score_gemma":0.002701493,"domain_scores_codex":[0.9938608,0.001002605,0.000869053,0.0006511367,0.003229398,0.0003870319],"domain_scores_gemma":[0.952688,0.0324799,0.003408508,0.001971537,0.007600547,0.001851488],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0001778271,0.0001071267,0.01107022,0.001912651,0.00003944377,0.0001374852,0.0008879951,0.001033562,0.002682377,0.007835098,0.02835113,0.9457651],"study_design_scores_gemma":[0.00002592522,0.0002317376,0.02747479,0.002828402,0.0000828023,0.001404488,0.0008696826,0.003743049,0.00527626,0.008905792,0.9490344,0.0001227438],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.1820866,0.4900165,0.1965506,0.01157669,0.001690062,0.0004205749,0.01086371,0.01545874,0.09133645],"genre_scores_gemma":[0.2155999,0.4459884,0.2470453,0.00676854,0.00239914,0.0006325454,0.04297026,0.01265469,0.02594123],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.9983952,"threshold_uncertainty_score":0.04570293,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1493610557460349,"score_gpt":0.3737924581222237,"score_spread":0.2244314023761889,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}