{"id":"W2103723119","doi":"10.1002/prot.24054","title":"Fold of the conserved DTC domain in deltex proteins","year":2012,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Ontario Ministry of Research and Innovation; Genome Canada; Canadian Institutes of Health Research; Knut och Alice Wallenbergs Stiftelse; Wellcome Trust; Ontario Genomics Institute","keywords":"Ubiquitin ligase; LIM domain; Biology; Cell biology; Ubiquitin; Genetics; Gene; Transcription factor; Zinc finger","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002290839,0.0001524235,0.0001384622,0.00004796791,0.00008875791,0.00001754558,0.0001188109,0.0001832315,0.00003969564],"category_scores_gemma":[0.00006934536,0.000100016,0.00005999451,0.0001464968,0.0001065271,0.00001745881,0.0001196306,0.0001460075,0.000002045114],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001105312,"about_ca_system_score_gemma":0.0000526135,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001858243,"about_ca_topic_score_gemma":0.00006742357,"domain_scores_codex":[0.9991347,0.00005908082,0.0003148733,0.0001000767,0.0001474683,0.0002438545],"domain_scores_gemma":[0.9994294,0.000006154907,0.0001775402,0.0002658024,0.00004933914,0.00007178458],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003435016,0.0001047961,0.07293476,0.0006008158,0.00007351247,2.106266e-7,0.001197196,0.00001328637,0.906964,0.004055073,0.0004419986,0.01327084],"study_design_scores_gemma":[0.001929041,0.0004921793,0.05917458,0.0001037415,0.00003172154,0.0000542405,0.0007603244,0.0002332677,0.9050792,0.002222134,0.02951388,0.0004056196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933398,0.0004256281,0.003391128,0.0001426496,0.0002190706,0.001080649,0.0000585735,0.00001113608,0.001331373],"genre_scores_gemma":[0.9916303,0.0000193404,0.007729168,0.000325248,0.0001174747,0.00004173412,0.00003480776,0.00001037994,0.0000915389],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02907189,"threshold_uncertainty_score":0.4078534,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009471930743893827,"score_gpt":0.2084588749073975,"score_spread":0.1989869441635037,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}