{"id":"W2103841681","doi":"10.1093/jac/dkp218","title":"Comparison of full gyrA, gyrB, parC and parE gene sequences between all Ureaplasma parvum and Ureaplasma urealyticum serovars to separate true fluoroquinolone antibiotic resistance mutations from non-resistance polymorphism","year":2009,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Alberta","keywords":"Ureaplasma urealyticum; Serotype; Microbiology; Biology; Ureaplasma; Virology; Antibacterial agent; Gene; Mycoplasmataceae; Antibiotics; Genetics; Mollicutes; Mycoplasma","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000245685,0.0004452461,0.001235065,0.0003004489,0.0002176832,0.00007561519,0.0003525997,0.0003510993,0.00005575079],"category_scores_gemma":[0.00006580554,0.0004142658,0.0001943153,0.0003068389,0.0004237131,0.000256255,0.00003686968,0.0004170823,0.00001504871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008124251,"about_ca_system_score_gemma":0.0001703103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001258452,"about_ca_topic_score_gemma":0.0003524539,"domain_scores_codex":[0.9975806,0.0001905353,0.001109573,0.0004752338,0.0001301005,0.0005139299],"domain_scores_gemma":[0.9979264,0.0002639401,0.001037898,0.0003271085,0.00028493,0.0001597843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001722376,0.0003601735,0.03099462,0.00004486829,0.0008061562,0.00003086662,0.001378088,0.00006670562,0.9545329,0.00002186376,0.00919456,0.0008468746],"study_design_scores_gemma":[0.004132498,0.001036944,0.154898,0.0003974971,0.0004302941,0.0001982373,0.0001426743,0.000007063372,0.8353711,0.0002735646,0.002612339,0.0004998493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916485,0.003368495,0.0003531278,0.003458189,0.0003025896,0.0003418745,0.0004185064,0.00003642654,0.00007229262],"genre_scores_gemma":[0.9947842,0.0007748426,0.003212346,0.0007398105,0.0001450735,0.000001397218,0.0000884178,0.00003795437,0.0002160055],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1239033,"threshold_uncertainty_score":0.9998309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0165096809528879,"score_gpt":0.2875652225535324,"score_spread":0.2710555416006445,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}