{"id":"W2103974482","doi":"10.1128/jcm.06170-11","title":"Next-Generation Sequencing of Prostate Tumors Provides Independent Evidence of Xenotropic Murine Leukemia Virus-Related Gammaretrovirus Contamination","year":2011,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency; University of British Columbia","funders":"BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre","keywords":"Gammaretrovirus; Virology; Contamination; Leukemia; Virus; Biology; Medicine; Cancer research; Murine leukemia virus; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000852585,0.0003321512,0.0004035454,0.0003679417,0.0002899109,0.0007088144,0.0002847356,0.002266591,0.001760962],"category_scores_gemma":[0.003465172,0.0001386524,0.0001947116,0.0002931819,0.0004056444,0.00030179,0.0001921701,0.001695371,0.001341762],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003087016,"about_ca_system_score_gemma":0.0001342498,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002178703,"about_ca_topic_score_gemma":0.0003938746,"domain_scores_codex":[0.9991141,0.0002499435,0.00008434897,0.0001395822,0.000283232,0.000128769],"domain_scores_gemma":[0.9974874,0.001608004,0.0002104895,0.000268238,0.0003194956,0.0001063839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002673809,0.000373541,0.07296677,0.0009404788,0.0001570373,0.1529333,0.001290166,0.0007733154,0.4799268,0.008927023,0.06611934,0.2129184],"study_design_scores_gemma":[0.0001789868,0.001390348,0.05232055,0.0002745515,0.0002511297,0.4316781,0.0008363688,0.009114363,0.2311138,0.007839085,0.264925,0.00007788165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7161177,0.0167305,0.07939023,0.09772328,0.01073068,0.0003081073,0.001814006,0.001188494,0.07599704],"genre_scores_gemma":[0.9459051,0.004820197,0.01102476,0.02766484,0.003576797,0.00006641355,0.0006928782,0.0001057127,0.006143322],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002266591,"threshold_uncertainty_score":0.005891025,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09357738781927634,"score_gpt":0.3193045238117417,"score_spread":0.2257271359924654,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}