{"id":"W2104040667","doi":"10.1002/yea.3135","title":"Transcriptomic profiling of chemical exposure reveals roles of Yap1 in protecting yeast cells from oxidative and other types of stresses","year":2015,"lang":"en","type":"article","venue":"Yeast","topic":"Genetically Modified Organisms Research","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"National Natural Science Foundation of China","keywords":"YAP1; Biology; Transcriptome; Mutant; Downregulation and upregulation; Gene; Oxidative phosphorylation; Biochemistry; Genetics; Cell biology; Molecular biology; Gene expression; Transcription factor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000199215,0.00006653462,0.000184529,0.00001130191,0.000009523666,0.000007075975,0.0001290082,0.00006737125,0.00005670661],"category_scores_gemma":[0.00009849587,0.00002994312,0.00002248283,0.0001307106,0.0001014001,0.00002625548,0.00004296116,0.00008843948,0.000001348933],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006382056,"about_ca_system_score_gemma":0.00001363323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006065359,"about_ca_topic_score_gemma":0.0002270041,"domain_scores_codex":[0.9992676,0.00008599686,0.0002083786,0.0001470789,0.0001756153,0.0001153104],"domain_scores_gemma":[0.9996923,0.00006311299,0.00007538363,0.00004011836,0.00007943705,0.00004962945],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005999772,0.00006062752,0.01411561,0.00002384139,0.00000726087,3.089904e-7,0.0005357343,0.000004788752,0.9813519,0.00001944077,0.000003868975,0.003816655],"study_design_scores_gemma":[0.0001694496,0.0001233044,0.01829761,0.00007045607,0.000004116941,3.086093e-7,0.001871932,0.000025177,0.9790071,0.0003738283,0.000007306472,0.0000494483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992147,0.000197215,0.000005151101,0.00003763907,0.000009111605,0.0002054934,0.0001522258,0.000004794793,0.0001736747],"genre_scores_gemma":[0.9990363,0.000003764579,0.0009085747,0.000003358276,0.0000263183,0.000005278946,0.000004206818,0.000001266021,0.00001092171],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004182004,"threshold_uncertainty_score":0.1221045,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04256681760750296,"score_gpt":0.2477940928854434,"score_spread":0.2052272752779405,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}