{"id":"W2104149925","doi":"10.1128/jcm.44.4.1283-1287.2006","title":"Follow-Up on Diagnostic Proficiency of Laboratories Equipped To Perform Orthopoxvirus Detection and Quantification by PCR: the Second International External Quality Assurance Study","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Faculty of Medicine Siriraj Hospital, Mahidol University; Statens Serum Institut; Russian Academy of Sciences; Rijksinstituut voor Volksgezondheid en Milieu; European Commission; Univerza v Ljubljani; Aristotle University of Thessaloniki; Health Canada; Robert Koch Institut; Mahidol University; Instituto de Salud Carlos III; KU Leuven","keywords":"Orthopoxvirus; Monkeypox; Virology; Genotyping; Vaccinia; Quality assurance; Medicine; Biology; External quality assessment; Genotype; Pathology; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003413814,0.0001565691,0.0005425726,0.0001075432,0.0002282803,0.00003985206,0.0004283583,0.0002362656,0.000156786],"category_scores_gemma":[0.004060292,0.0001000615,0.0001517336,0.0001624219,0.0004128787,0.0001063729,0.00009410344,0.0006776326,0.00004350357],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003343565,"about_ca_system_score_gemma":0.000142008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001373676,"about_ca_topic_score_gemma":0.0009698779,"domain_scores_codex":[0.9966684,0.00111858,0.001588517,0.0002750052,0.00007233767,0.0002771416],"domain_scores_gemma":[0.9949979,0.00324239,0.0009637023,0.0002292888,0.0005206569,0.00004607025],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00233088,0.0007290652,0.1829935,0.00001157107,0.0001566764,0.000003392602,0.0001220625,0.000003097134,0.8009602,0.0001287112,0.002274557,0.01028629],"study_design_scores_gemma":[0.00541729,0.005295304,0.6866489,0.00006449038,0.00006403732,0.0001263125,0.0005373516,0.000002198011,0.2345721,0.0002856778,0.06676439,0.0002218769],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949504,0.001184198,0.0003761368,0.0005444702,0.002309524,0.000355572,0.0001644241,0.000007472917,0.0001078604],"genre_scores_gemma":[0.9986128,0.0001247388,0.0000329909,0.0001744379,0.0001757219,0.00001119013,0.00001429681,0.000008751868,0.00084511],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.566388,"threshold_uncertainty_score":0.4860842,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04184203961427145,"score_gpt":0.3821803804018815,"score_spread":0.34033834078761,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}