{"id":"W2104502840","doi":"10.1093/bioinformatics/btu808","title":"Kablammo: an interactive, web-based BLAST results visualizer","year":2014,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Alberta Innovates - Health Solutions","keywords":"Computer science; MIT License; Visualization; License; Source code; Web application; Code (set theory); Interactive visualization; Sequence (biology); Software; World Wide Web; Programming language; Data mining; Biology; Operating system; Set (abstract data type); Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002429214,0.002357947,0.001255482,0.003471075,0.001259138,0.002135064,0.003186127,0.001662461,0.08344719],"category_scores_gemma":[0.006193495,0.001431087,0.001158732,0.002069254,0.0004863061,0.003778803,0.002952265,0.002392541,0.0487996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006487778,"about_ca_system_score_gemma":0.0009518045,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002703307,"about_ca_topic_score_gemma":0.003031881,"domain_scores_codex":[0.9989706,0.0001911733,0.0001047297,0.0002125168,0.0004171839,0.0001038302],"domain_scores_gemma":[0.9979813,0.0009227163,0.0002054291,0.0002635043,0.0003813737,0.0002456423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001617535,0.0001352607,0.002179506,0.00186823,0.00014276,0.0005391805,0.0004477197,0.001253954,0.03278214,0.003985439,0.8537884,0.1012598],"study_design_scores_gemma":[0.000982827,0.0002117678,0.0085664,0.0009079129,0.0001682038,0.002254849,0.0003502714,0.05600054,0.07217555,0.02419354,0.8336594,0.0005287533],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.006458936,0.0009316656,0.1347515,0.001109724,0.0003323696,0.0002862678,0.05850513,0.7789531,0.01867127],"genre_scores_gemma":[0.06977032,0.001643122,0.504865,0.001846475,0.0003168535,0.001844489,0.1975256,0.1943355,0.0278526],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.08344719,"threshold_uncertainty_score":0.2791587,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01073669606109645,"score_gpt":0.2563567379274806,"score_spread":0.2456200418663841,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}