{"id":"W2104552962","doi":"10.1128/jb.00722-12","title":"Genome Sequence of the Polychlorinated-Biphenyl Degrader Pseudomonas pseudoalcaligenes KF707","year":2012,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Infections and bacterial resistance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Canadian Food Inspection Agency","funders":"Natural Sciences and Engineering Research Council of Canada; Ministero dell’Istruzione, dell’Università e della Ricerca","keywords":"Biology; Polychlorinated biphenyl; Whole genome sequencing; Pseudomonas; Biphenyl; Chemotaxis; Microbiology; Genome; Bacteria; Genetics; Ecology; Gene; Chemistry; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003280594,0.0001275492,0.0002379635,0.00005019484,0.00007188834,0.000008740719,0.0002829691,0.0001651085,0.00005306826],"category_scores_gemma":[0.0001031427,0.00008248616,0.0002081455,0.00009927083,0.0001835949,0.00001321236,0.00008939637,0.0001339546,0.000003220506],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000254183,"about_ca_system_score_gemma":0.0001091927,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001048238,"about_ca_topic_score_gemma":0.000006544743,"domain_scores_codex":[0.9990195,0.000132619,0.0003867655,0.0001012989,0.00009469139,0.0002651055],"domain_scores_gemma":[0.998994,0.00001884832,0.0004824757,0.000251845,0.0001727922,0.00008005799],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001310475,0.00006633196,0.02136542,0.00001088224,0.00007096833,0.000001391476,0.00003054552,0.000007491893,0.9777883,0.0001729771,0.0000889516,0.0002657312],"study_design_scores_gemma":[0.000475975,0.0004751414,0.3089482,0.00002485301,0.00005438815,0.0008821665,0.00004453043,7.592367e-7,0.5603653,0.00007842004,0.1284793,0.0001710281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965031,0.0008761337,0.0002576052,0.0001658362,0.001824116,0.00006474541,0.00002161107,0.000002130586,0.000284748],"genre_scores_gemma":[0.9980052,0.000322418,0.0003487848,0.0001165202,0.0008394807,0.000002561794,0.000006843897,0.00001319772,0.0003449854],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.417423,"threshold_uncertainty_score":0.3363688,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0181298563042096,"score_gpt":0.2626197490257581,"score_spread":0.2444898927215485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}