{"id":"W2104681263","doi":"10.1128/jb.00859-10","title":"Draft Genome Sequence of <i>Streptomyces clavuligerus</i> NRRL 3585, a Producer of Diverse Secondary Metabolites","year":2010,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Ministry of Education, Science and Technology; Korea Research Institute of Bioscience and Biotechnology; Broad Institute","keywords":"Streptomyces clavuligerus; Biology; Whole genome sequencing; Genome; Genetics; Pyrosequencing; Streptomyces; Clavulanic acid; Gene; Plasmid; Computational biology; Antibiotics; Actinomycetales; Bacteria; Amoxicillin","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005574967,0.0001557659,0.0008274794,0.0002097564,0.00002816022,0.000006303655,0.0002224692,0.0001726874,0.001162166],"category_scores_gemma":[0.0004374591,0.0001005608,0.0002352083,0.0001570828,0.0003743806,0.0001607998,0.0000739473,0.0005998203,0.000006382503],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001496105,"about_ca_system_score_gemma":0.0002955462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003050839,"about_ca_topic_score_gemma":0.000008293873,"domain_scores_codex":[0.9985812,0.00007918007,0.0007951942,0.000192794,0.0001496399,0.0002019504],"domain_scores_gemma":[0.9979715,0.00008778815,0.0009424405,0.000285643,0.0006031355,0.0001095328],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000435849,0.0001259697,0.005331067,0.0001773441,0.0002083515,0.00003868009,0.0002818991,2.315968e-7,0.9884012,0.00003360662,0.000386001,0.00457976],"study_design_scores_gemma":[0.0006781329,0.0006023508,0.05796989,0.00007755597,0.0002493476,0.001083835,0.00009333364,5.260175e-7,0.881757,0.00006123022,0.05731851,0.0001082531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995816,0.000979621,0.000001228705,0.001865877,0.0008612477,0.000140745,0.00009161721,0.000005754512,0.0002379433],"genre_scores_gemma":[0.996205,0.0003730331,0.002238633,0.0002695924,0.0006329378,2.241628e-7,0.00001072565,0.00001179622,0.0002580451],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1066442,"threshold_uncertainty_score":0.9997509,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01504593434523829,"score_gpt":0.260215874223969,"score_spread":0.2451699398787307,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}