{"id":"W2104730869","doi":"10.1261/rna.2044610","title":"Modular domains of the <i>Dicistroviridae</i> intergenic internal ribosome entry site","year":2010,"lang":"en","type":"article","venue":"RNA","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Internal ribosome entry site; Biology; Ribosome; Shine-Dalgarno sequence; Eukaryotic Ribosome; Translation (biology); Ribosomal binding site; Transfer RNA; EIF4E; Eukaryotic translation; Genetics; T arm; Cell biology; Computational biology; RNA; Messenger RNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000149213,0.0001126612,0.0001094513,0.00001623697,0.000048074,0.00001184843,0.0003897495,0.0001220346,0.00010531],"category_scores_gemma":[0.00007060469,0.00008039968,0.0001695165,0.00004518177,0.00008450011,0.000002606125,0.0001872212,0.0001378733,0.0000217144],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004273479,"about_ca_system_score_gemma":0.000029098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002104903,"about_ca_topic_score_gemma":0.0000345076,"domain_scores_codex":[0.9992826,0.00004635478,0.0001786484,0.0001957882,0.0001314674,0.0001651193],"domain_scores_gemma":[0.9992777,0.000006682379,0.0001062367,0.0005197221,0.00003662637,0.00005305399],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000408497,0.00002846999,0.001309669,0.000008720405,0.00003183247,0.000001161123,0.00002368177,0.000003343705,0.9957312,0.0003138394,0.0003581565,0.002149042],"study_design_scores_gemma":[0.0001798492,0.00007285489,0.001341137,0.00001618525,0.00001489457,0.00001776542,0.000009368936,0.00001562005,0.9752516,0.0003900605,0.02259845,0.00009217551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945005,0.0001778244,0.001882337,0.0001382812,0.0006465535,0.0001131395,0.00002547927,0.000006467506,0.002509461],"genre_scores_gemma":[0.9975879,0.00004729459,0.0005168345,0.0002046917,0.0002814416,0.000009716777,0.000008602831,0.00001674053,0.001326826],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02224029,"threshold_uncertainty_score":0.3278604,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003592745295506086,"score_gpt":0.2059724224741726,"score_spread":0.2023796771786665,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}