{"id":"W2104913188","doi":"10.1101/sqb.2005.70.018","title":"Identifying Site-specific Metastasis Genes and Functions","year":2005,"lang":"en","type":"article","venue":"Cold Spring Harbor Symposia on Quantitative Biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Metastasis; Primary tumor; Gene; Transcriptome; Biology; Tumor progression; Breast cancer; Cancer; Metastatic breast cancer; Cancer research; Gene expression; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001561742,0.0001915958,0.0001912787,0.00009746916,0.0001688429,0.00004929798,0.0001191748,0.0001236065,0.00002464064],"category_scores_gemma":[0.00007295755,0.0001950144,0.00008139315,0.0000799088,0.000143402,0.000005049361,0.0001164093,0.0000930488,0.00008486325],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003489723,"about_ca_system_score_gemma":0.000035581,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002371985,"about_ca_topic_score_gemma":0.00007946564,"domain_scores_codex":[0.9988962,0.00006677717,0.0002165375,0.0004970976,0.00005599191,0.0002673502],"domain_scores_gemma":[0.9993314,0.000105313,0.00009337372,0.0002890925,0.00008363892,0.00009719679],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006082477,0.00003594891,0.002157321,0.00000527454,0.00005244634,0.000001263269,0.00001961643,0.00006594568,0.5886179,0.4079101,0.0002433253,0.0008300979],"study_design_scores_gemma":[0.000468877,0.000509379,0.005309045,0.00001353284,0.00003155362,0.000001409296,0.00004485889,0.00007831346,0.1503716,0.00002513591,0.8428931,0.0002532316],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9298397,0.06186973,0.006784301,0.0003896875,0.0003787363,0.0001971084,0.0001178671,0.00002439429,0.0003984521],"genre_scores_gemma":[0.9840702,0.008236082,0.006739482,0.0003839907,0.0003344736,0.00004867432,0.00002314126,0.00003161129,0.0001323874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8426498,"threshold_uncertainty_score":0.7952455,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02933369263794732,"score_gpt":0.2855885880823379,"score_spread":0.2562548954443906,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}