{"id":"W2104913188","doi":"10.1101/sqb.2005.70.018","title":"Identifying Site-specific Metastasis Genes and Functions","year":2005,"lang":"en","type":"article","venue":"Cold Spring Harbor Symposia on Quantitative Biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Metastasis; Primary tumor; Gene; Transcriptome; Biology; Tumor progression; Breast cancer; Cancer; Metastatic breast cancer; Cancer research; Gene expression; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002618938,0.0002581674,0.000423343,0.0009600496,0.0002405004,0.0004312149,0.000256012,0.0003526399,0.00207185],"category_scores_gemma":[0.0004401143,0.0001062414,0.0002652862,0.0007359886,0.0001924933,0.0002930371,0.0002307493,0.0003547895,0.0008540713],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003128042,"about_ca_system_score_gemma":0.0002674616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008799986,"about_ca_topic_score_gemma":0.001681705,"domain_scores_codex":[0.9998748,0.00001524717,0.00000603878,0.00003875354,0.00003632017,0.00002876899],"domain_scores_gemma":[0.9998184,0.00005342426,0.00002510585,0.00001618626,0.00004904815,0.00003775969],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001476743,0.00002278344,0.01691377,0.0001903353,0.00001664601,0.0002074218,0.00005926819,0.0003271931,0.9456862,0.0008981304,0.0006669383,0.03486353],"study_design_scores_gemma":[0.00005526234,0.0007143439,0.3464814,0.00008370372,0.0001787586,0.003909085,0.0004504825,0.008208357,0.5842013,0.004294967,0.05137337,0.00004880807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.948027,0.01138484,0.02810091,0.000402417,0.00005415714,0.0001227051,0.005410071,0.0003457712,0.006152178],"genre_scores_gemma":[0.9532845,0.004635908,0.03087037,0.0002042706,0.00004352495,0.0001018829,0.00579704,0.00006369791,0.004998775],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00207185,"threshold_uncertainty_score":0.006931067,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02933369263794732,"score_gpt":0.2855885880823379,"score_spread":0.2562548954443906,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}