{"id":"W2105580430","doi":"10.1080/10635150701245370","title":"Properties of Supertree Methods in the Consensus Setting","year":2007,"lang":"en","type":"article","venue":"Systematic Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Supertree; Biology; Evolutionary biology; Computational biology; Phylogenetic tree; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002600303,0.0000993443,0.000264499,0.00003852561,0.00003489727,0.000003982414,0.0001953437,0.0001040182,8.032105e-7],"category_scores_gemma":[0.0004050603,0.00005590338,0.00006139673,0.00006215069,0.0001119474,1.142317e-7,0.00009117951,0.00005127726,9.353726e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004575936,"about_ca_system_score_gemma":0.00002433737,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004071849,"about_ca_topic_score_gemma":0.00007287977,"domain_scores_codex":[0.9986715,0.0004813231,0.0004571059,0.0001597883,0.00003933169,0.000190895],"domain_scores_gemma":[0.9993759,0.0001339483,0.0001266163,0.0002922257,0.00005659329,0.0000146616],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001613664,0.00001783856,0.01222413,0.001502908,0.00005181971,8.404029e-7,0.0007292037,0.000005713862,0.9847311,0.0005512843,0.000008141095,0.0001608608],"study_design_scores_gemma":[0.0006321335,0.0004121885,0.0197347,0.0007100767,0.00006667191,0.0001146352,0.01054859,0.0001144645,0.9659086,0.001270127,0.0002006412,0.0002871838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905412,0.006533187,0.001723671,0.0001384161,0.0001111383,0.0004434493,0.000002273757,0.000001454405,0.0005052126],"genre_scores_gemma":[0.9937083,0.0000160924,0.00605479,0.0001277916,0.00004515808,0.0000298807,0.000001551378,0.00000591547,0.00001049361],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01882253,"threshold_uncertainty_score":0.2279674,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03593069055954105,"score_gpt":0.3218174571059653,"score_spread":0.2858867665464243,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}