{"id":"W2105583858","doi":"10.1128/jvi.00789-06","title":"Characterization of Membrane Association Domains within the <i>Tomato Ringspot Nepovirus</i> X2 Protein, an Endoplasmic Reticulum-Targeted Polytopic MembraneProtein","year":2006,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of California, San Diego","keywords":"Biology; Endoplasmic reticulum; Vesicle-associated membrane protein 8; ER retention; Transmembrane domain; Cell biology; Membrane protein; Transmembrane protein; Biochemistry; Membrane; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001174567,0.0001429747,0.0003639473,0.00004415183,0.0001992789,0.000037747,0.0003558042,0.0001510574,0.00006999397],"category_scores_gemma":[0.0002914939,0.00005207516,0.0001113378,0.0002825883,0.0001075266,0.000248856,0.00005588389,0.0003160125,0.000007240842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005320261,"about_ca_system_score_gemma":0.00002738415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003038085,"about_ca_topic_score_gemma":0.0006489297,"domain_scores_codex":[0.9978761,0.0005050501,0.0006523352,0.0001584817,0.0005146104,0.0002934346],"domain_scores_gemma":[0.9982416,0.0002317231,0.001168063,0.00006824209,0.0002271304,0.00006324822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001644365,0.0001204931,0.003090952,0.000009934183,0.00004681507,0.00001634005,0.00007232589,0.00002652847,0.9959373,0.0001987547,0.00004835399,0.0002677254],"study_design_scores_gemma":[0.0003710502,0.0006477117,0.1477413,0.00002251524,0.00002778213,0.00007787477,0.0000588598,0.0001165042,0.8489574,0.0003594563,0.001522768,0.00009677342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963596,0.00008594619,0.000006912531,0.00287125,0.0001123681,0.0003346954,0.00009726281,0.00001799291,0.0001139581],"genre_scores_gemma":[0.9990899,0.00005509701,0.00005969338,0.00018687,0.0003811627,0.00001246787,0.00003764404,0.00000183558,0.0001753379],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1469799,"threshold_uncertainty_score":0.2123563,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008798703426596643,"score_gpt":0.2103522663128421,"score_spread":0.2015535628862455,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}