{"id":"W2105611495","doi":"10.1093/nar/gkg577","title":"DePIE: Designing Primers for Protein Interaction Experiments","year":2003,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Primer (cosmetics); Biology; Computational biology; Perl; Java; Genetics; Computer science; Programming language","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006932572,0.004400234,0.00344066,0.005432261,0.001448756,0.001742205,0.003335032,0.002668789,0.02021983],"category_scores_gemma":[0.007851208,0.004922322,0.003035975,0.002765519,0.001145776,0.002048208,0.002222755,0.00563836,0.02488548],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001037654,"about_ca_system_score_gemma":0.001885476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006047324,"about_ca_topic_score_gemma":0.001503721,"domain_scores_codex":[0.9933881,0.002014296,0.0008808755,0.001901755,0.001057227,0.0007576206],"domain_scores_gemma":[0.995828,0.002304123,0.0003744709,0.0005521682,0.0006799824,0.0002612967],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001645864,0.0005826483,0.001513182,0.004527024,0.0002938122,0.0009061389,0.0005866301,0.003497612,0.8082848,0.009216545,0.05171402,0.1172317],"study_design_scores_gemma":[0.0004925032,0.000742305,0.002398778,0.000421595,0.0002723783,0.001839775,0.0001699976,0.01491959,0.6738109,0.005381128,0.2993204,0.0002307725],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.01191743,0.002677939,0.9471945,0.0003838261,0.0004322378,0.003184486,0.01214377,0.01698797,0.005077987],"genre_scores_gemma":[0.009763676,0.0008157756,0.9615391,0.0006172694,0.00004491612,0.004696988,0.01485415,0.00229003,0.005378051],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.02021983,"threshold_uncertainty_score":0.06764209,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05588983035510313,"score_gpt":0.3622763253707551,"score_spread":0.306386495015652,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}