{"id":"W2105682433","doi":"10.1099/vir.0.029777-0","title":"Endogenously expressed matrix protein M1 and nucleoprotein of influenza A are efficiently presented by class I and class II major histocompatibility complexes","year":2011,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique; Centre Hospitalier de l’Université de Montréal; Armand Frappier Museum; Hôpital Notre-Dame","funders":"Canadian Institutes of Health Research","keywords":"Biology; Virology; Cytotoxic T cell; Nucleoprotein; Major histocompatibility complex; MHC class I; Antigen processing; Antigen presentation; CD8; Antigen; Immunology; Neuraminidase; MHC restriction; T cell; Virus; Immune system; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007271652,0.0002711812,0.001017115,0.0003023382,0.0002005711,0.0000119268,0.0002155488,0.0001896026,0.00008557968],"category_scores_gemma":[0.0004270623,0.0002080376,0.0001334725,0.0001515349,0.0008997735,0.0001276068,0.0003303941,0.0005512438,0.000001835897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009553657,"about_ca_system_score_gemma":0.0001166516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004953379,"about_ca_topic_score_gemma":0.00005746766,"domain_scores_codex":[0.9973991,0.0003613951,0.001000164,0.000321009,0.0004474423,0.000470922],"domain_scores_gemma":[0.9979138,0.00008912411,0.0008417834,0.0003298092,0.0005440013,0.000281493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005574597,0.0006944945,0.0274907,0.0003562486,0.0003389105,0.00008011297,0.001405572,0.000008364972,0.9604374,0.0001091928,0.003108926,0.0003955384],"study_design_scores_gemma":[0.02669213,0.01905742,0.3422219,0.0005582776,0.0005703496,0.0009041786,0.0007811313,0.001258078,0.551576,0.001186264,0.05447513,0.000719099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910609,0.006701013,0.00006164234,0.0006194619,0.0000454915,0.001244071,0.00008381161,0.00001631557,0.0001672876],"genre_scores_gemma":[0.9958945,0.0001123124,0.003090345,0.0005067349,0.0001119261,0.000042576,0.000002471372,0.00003022659,0.0002089113],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4088613,"threshold_uncertainty_score":0.8483527,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06729197993268146,"score_gpt":0.3314772024315727,"score_spread":0.2641852224988913,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}