{"id":"W2105742133","doi":"10.1111/j.1365-2958.2009.06671.x","title":"Identification of genes involved in the assembly and attachment of a novel flagellin <i>N</i>‐linked tetrasaccharide important for motility in the archaeon <i>Methanococcus maripaludis</i>","year":2009,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences; Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Methanococcus; Biology; Biochemistry; Glycan; Flagellin; Tetrasaccharide; Glycosyltransferase; Gene; Mutant; Acetylation; Glycoprotein; Escherichia coli; Polysaccharide","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001692211,0.0001379336,0.0002129163,0.0001022112,0.00003272175,0.00001037195,0.0003732645,0.0001668552,0.00000149486],"category_scores_gemma":[0.0001607872,0.00009544662,0.00009241601,0.0002006046,0.0001642437,0.000003821368,0.00005647428,0.0001249822,2.027568e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001082926,"about_ca_system_score_gemma":0.00005416734,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007367237,"about_ca_topic_score_gemma":0.0002378677,"domain_scores_codex":[0.9984662,0.0002911214,0.0005753153,0.0003361846,0.00008882592,0.0002423456],"domain_scores_gemma":[0.9991934,0.00006282521,0.0001946748,0.0004301665,0.00009825041,0.00002066143],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001352144,0.0002580559,0.003655468,0.00003849743,0.0000151311,0.000002753295,0.000226793,0.00004846469,0.9943172,0.0002016281,0.00003021064,0.001070585],"study_design_scores_gemma":[0.001129009,0.0003829976,0.01946777,0.00001167813,0.00001212263,0.0000135971,0.0001893572,0.000292887,0.9772078,0.0003005095,0.0009016076,0.00009070514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.988089,0.001663743,0.008211751,0.000730191,0.00002417055,0.00118583,0.00007531299,0.000001976495,0.00001799634],"genre_scores_gemma":[0.9984825,0.0001993921,0.0005708032,0.00044046,0.00001318175,0.00008646953,0.0001896976,0.000006865651,0.00001061469],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01710944,"threshold_uncertainty_score":0.38922,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0187795658270562,"score_gpt":0.2981455762181329,"score_spread":0.2793660103910767,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}