{"id":"W2105880313","doi":"10.1093/gbe/evv002","title":"Studying Genome Heterogeneity within the Arbuscular Mycorrhizal Fungal Cytoplasm","year":2015,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Cégep Marie-Victorin","funders":"Natural Sciences and Engineering Research Council of Canada; Compute Canada","keywords":"Biology; Rhizophagus irregularis; Genome; Genetic diversity; Genetics; Pyrosequencing; Genetic variation; Genomics; Evolutionary biology; Gene; Symbiosis; Arbuscular mycorrhizal; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005063248,0.0001371621,0.0001453708,0.00001221058,0.0004350039,0.00003570414,0.0001665439,0.0001394375,0.0001693797],"category_scores_gemma":[0.0001285227,0.00004879304,0.00005989049,0.0001539774,0.00003142991,0.00008866435,0.00009191478,0.0001834525,0.0003140132],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000462859,"about_ca_system_score_gemma":0.00001495722,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005365454,"about_ca_topic_score_gemma":0.000348457,"domain_scores_codex":[0.9989958,0.0002066458,0.0001891255,0.0002756561,0.00008022041,0.0002525624],"domain_scores_gemma":[0.9993488,0.0003148166,0.00008233906,0.00007071419,0.00006119589,0.0001221504],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001586185,0.00005914138,0.8127611,0.000003987525,0.00005948007,0.000006047862,0.0002769422,0.0001411376,0.1806446,0.005175896,0.0002757101,0.0004373102],"study_design_scores_gemma":[0.0001454544,0.0006459712,0.9401416,0.000009190611,0.0000553882,0.0003642332,0.001038574,0.0005006006,0.0002635863,0.006761902,0.04972535,0.0003481926],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945167,0.003145003,0.0001105648,0.0004090683,0.0005076119,0.0001953812,0.0003604726,0.00005360418,0.0007015944],"genre_scores_gemma":[0.9985301,0.0001805171,0.00005582152,0.0001794553,0.0004641313,0.000018837,0.0004646101,9.411683e-7,0.0001055634],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.180381,"threshold_uncertainty_score":0.4036109,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02805487986975917,"score_gpt":0.2303322038129694,"score_spread":0.2022773239432102,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}