{"id":"W2106400683","doi":"10.5539/jmbr.v3n1p37","title":"Identification and In-vivo Characterization of a Novel OhrR Transcriptional Regulator in Burkholderia xenovorans LB400","year":2013,"lang":"en","type":"article","venue":"Journal of Molecular Biology Research","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Los Alamos National Laboratory; Laboratory Directed Research and Development; U.S. Department of Energy","keywords":"Effector; Electrophoretic mobility shift assay; Burkholderia; Transcriptional regulation; Biochemistry; Regulator; Function (biology); Cysteine; Affinity chromatography; Chemistry; Biology; Transcription factor; Gene; Cell biology; Genetics; Enzyme","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008951533,0.00009818516,0.0002171513,0.0004207519,0.00002337382,0.00001892411,0.0002299072,0.0003758385,0.00002799108],"category_scores_gemma":[0.0001142719,0.00008925187,0.00005412365,0.0002687692,0.0002790211,0.000009804729,0.00007042345,0.0002516426,6.943325e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001913111,"about_ca_system_score_gemma":0.0001127689,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002672954,"about_ca_topic_score_gemma":0.00002021548,"domain_scores_codex":[0.9986656,0.0001896654,0.0005447097,0.0002193127,0.0001435391,0.0002372004],"domain_scores_gemma":[0.999186,0.00001294706,0.0001821623,0.0001815247,0.0003821847,0.00005521911],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001408684,0.0001525747,0.004141202,0.00002202139,0.00002630211,0.000002901642,0.00003243927,0.000005078981,0.9942433,0.0003911484,0.00001710022,0.0008250549],"study_design_scores_gemma":[0.001043319,0.0003809385,0.06453298,0.00003214063,0.000004880007,0.00004905953,0.00003379028,0.0001143462,0.9327255,0.0004014962,0.0005984124,0.00008309886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962083,0.0004147971,0.001962961,0.001037523,0.00009399213,0.0002458195,0.00001871081,0.000001160326,0.00001671611],"genre_scores_gemma":[0.9987993,0.0005191474,0.0004896388,0.00003544172,0.00006275284,0.00001396599,0.00002519547,0.00001164095,0.0000429691],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06151777,"threshold_uncertainty_score":0.3639585,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02369813326083176,"score_gpt":0.3131310574296045,"score_spread":0.2894329241687727,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}