{"id":"W2106928637","doi":"10.1139/g05-034","title":"Analyzing the potato abiotic stress transcriptome using expressed sequence tags","year":2005,"lang":"en","type":"article","venue":"Genome","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Arizona; National Science Foundation","keywords":"Biology; Abiotic stress; Expressed sequence tag; cDNA library; Transcriptome; Abiotic component; Gene; Genetics; Contig; Complementary DNA; Computational biology; Botany; Genome; Gene expression","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001326957,0.0001110987,0.0001172351,0.00000767388,0.0003084731,0.00007125442,0.0003109393,0.00004803525,0.0001749862],"category_scores_gemma":[0.000005678034,0.00003402683,0.00007742792,0.0002274533,0.00005859311,0.00009273223,0.00002346288,0.00008973092,0.00002580811],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002743523,"about_ca_system_score_gemma":0.000006100668,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006944044,"about_ca_topic_score_gemma":0.00024642,"domain_scores_codex":[0.9991658,0.0000476714,0.0001495903,0.0002192793,0.0001243343,0.0002933152],"domain_scores_gemma":[0.9997362,0.0000498211,0.00005353572,0.0000676113,0.00002519648,0.00006757071],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000005691162,0.00001552884,0.0004486402,0.000003655709,0.000006923775,0.000007670123,0.00009501745,0.0001882196,0.9948369,0.00003085662,0.000005773531,0.004355183],"study_design_scores_gemma":[0.0005835051,0.0002112226,0.6762683,0.0002036584,0.0001690129,0.0001463886,0.001975981,0.005465237,0.0757611,0.0005773244,0.2369138,0.001724418],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965875,0.00154528,0.00003371886,0.001119734,0.00004990436,0.0001054107,0.0002827978,0.00003645327,0.0002392382],"genre_scores_gemma":[0.9989487,0.0001277799,0.0002340797,0.0001775948,0.0002500813,0.000002870905,0.00002606308,8.675313e-7,0.0002319597],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9190757,"threshold_uncertainty_score":0.2372557,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03301255489414717,"score_gpt":0.2258252745904164,"score_spread":0.1928127196962693,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}