{"id":"W2106950540","doi":"10.1128/aem.69.4.1884-1889.2003","title":"Identification of <i>Streptomyces coelicolor</i> Proteins That Are Differentially Expressed in the Presence of Plant Material","year":2003,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Streptomyces coelicolor; Biochemistry; Peptide mass fingerprinting; Proteome; Biology; Bacteria; Pentose phosphate pathway; Lemna minor; Chemistry; Proteomics; Metabolism; Glycolysis; Gene; Mutant; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001076562,0.00007964465,0.0001326074,0.000008522085,0.00005674519,0.00001032245,0.0001422458,0.00006265561,0.0001066815],"category_scores_gemma":[0.000003721312,0.00003127792,0.00002289623,0.00003179527,0.000155843,0.00003053504,0.00003979874,0.00006240673,0.00000228778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006027687,"about_ca_system_score_gemma":0.000001345709,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007820548,"about_ca_topic_score_gemma":0.00007512548,"domain_scores_codex":[0.9994414,0.00008953766,0.000195106,0.0001381826,0.00002915481,0.0001065566],"domain_scores_gemma":[0.9996831,0.0000849186,0.0001649352,0.00005453331,0.000001746692,0.00001080015],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003972911,0.0001662454,0.004990717,0.00000662059,0.000005873473,3.592842e-7,0.0001137263,7.346129e-7,0.9941578,0.00006583079,0.00004333939,0.0004090186],"study_design_scores_gemma":[0.0001223489,0.00005505796,0.09162315,0.000009479551,0.000005368468,0.00001761497,0.001409729,8.998686e-7,0.9044722,0.00006896826,0.002156532,0.00005863916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985214,0.00003598092,0.000002176311,0.00004101907,0.00004394129,0.0002488182,0.001040371,0.000003045971,0.00006321765],"genre_scores_gemma":[0.9995032,0.0001105221,0.000009638212,0.00003148315,0.0000081734,0.00002926297,0.0002967185,5.218006e-7,0.00001046249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0896856,"threshold_uncertainty_score":0.1275477,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009267842974716872,"score_gpt":0.1721588550134311,"score_spread":0.1628910120387142,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}