{"id":"W2107094749","doi":"10.1128/iai.73.10.6249-6259.2005","title":"SseJ Deacylase Activity by <i>Salmonella enterica</i> Serovar Typhimurium Promotes Virulence in Mice","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":113,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; Ministero dello Sviluppo Economico; University of Toronto; Hospital for Sick Children; Ontario Innovation Trust; University of Washington","keywords":"Salmonella enterica; Biology; Virulence; Effector; Type three secretion system; Vacuole; Microbiology; Mutant; Salmonella; Secretion; Pathogenicity island; Bacterial outer membrane; Wild type; Cell biology; Cytoplasm; Biochemistry; Bacteria; Escherichia coli; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003371376,0.0007125075,0.0002424539,0.0006241174,0.0001465739,0.0003697456,0.0002434375,0.0004297794,0.001367629],"category_scores_gemma":[0.0001774195,0.0003115483,0.0003794725,0.0001589998,0.0004413871,0.0002298836,0.0002775328,0.0009386386,0.0005479575],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004058902,"about_ca_system_score_gemma":0.0002286448,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004777484,"about_ca_topic_score_gemma":0.0007830577,"domain_scores_codex":[0.9997103,0.00007095539,0.00002988187,0.00005561094,0.00004881891,0.00008443167],"domain_scores_gemma":[0.9995591,0.00004855561,0.0001617636,0.00004282616,0.00002594116,0.0001616494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000442626,0.00008603196,0.0004223802,0.00002779087,0.000006635687,0.00004828221,0.00001247315,0.00003510023,0.9978001,0.00009676672,0.00004883625,0.0009729956],"study_design_scores_gemma":[0.00006481218,0.001481867,0.008622982,0.00002083216,0.00003121614,0.0003487261,0.00005930644,0.0007352925,0.9861693,0.00008056865,0.002376821,0.000008175835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945207,0.0009316679,0.002034265,0.0002563619,0.00003621486,0.00002138497,0.0003628576,0.0002436855,0.001592914],"genre_scores_gemma":[0.9922069,0.0007098915,0.001875678,0.0001271761,0.00001785639,0.00003942775,0.0006304302,0.00008131804,0.004311332],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001367629,"threshold_uncertainty_score":0.004575193,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01497934947463856,"score_gpt":0.2340069004852881,"score_spread":0.2190275510106496,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}