{"id":"W2107183022","doi":"10.3201/eid1603.081689","title":"New Endemic<i>Legionella pneumophila</i>Serogroup I Clones, Ontario, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Legionnaires' disease; Legionella pneumophila; Molecular epidemiology; Outbreak; Biology; Legionella; Typing; Genetic diversity; Serotype; Multilocus sequence typing; Population; Virology; Microbiology; Genotype; Genetics; Medicine; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007090188,0.0002453093,0.0001754111,0.00006059205,0.0002616404,0.00005844353,0.0002800421,0.0001333408,0.0002381618],"category_scores_gemma":[0.00008404973,0.0002435702,0.000130191,0.0001486797,0.00006734499,0.000009133618,0.0001581378,0.000344952,0.00002028333],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008288232,"about_ca_system_score_gemma":0.002213181,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8429403,"about_ca_topic_score_gemma":0.969103,"domain_scores_codex":[0.9984674,0.00003377279,0.0002125595,0.0004787873,0.0003074461,0.0005000535],"domain_scores_gemma":[0.9988565,0.00002027457,0.00007351524,0.000490598,0.00009247604,0.0004666782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000588058,0.0001211734,0.5996248,0.0000245404,0.0001239644,0.00005357058,0.00005840172,0.0001153231,0.1639724,0.0002148365,0.2331489,0.002483294],"study_design_scores_gemma":[0.001127972,0.0001714689,0.09871848,0.0000156958,0.00006631696,0.0001242927,0.00004444777,0.00002205066,0.02191764,0.0003542131,0.8767626,0.0006747718],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928096,0.0004426014,0.0001266755,0.0003932122,0.001328822,0.0001748137,0.00002296829,0.00005888505,0.004642419],"genre_scores_gemma":[0.9928534,0.00009330617,0.00005267959,0.0006169807,0.001244262,0.00002304015,0.0001773059,0.00004117116,0.004897879],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6436138,"threshold_uncertainty_score":0.9932504,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004971623017652574,"score_gpt":0.2266279435858489,"score_spread":0.2216563205681963,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}