{"id":"W2107223447","doi":"10.1101/gr.904303","title":"Software for Automated Analysis of DNA Fingerprinting Gels","year":2003,"lang":"en","type":"article","venue":"Genome Research","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency","funders":"National Human Genome Research Institute; BC Cancer Agency; National Institutes of Health; Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre","keywords":"Restriction fragment; Biology; Terminal restriction fragment length polymorphism; Fragment (logic); Restriction fragment length polymorphism; Restriction site; Genome; Restriction enzyme; Computational biology; Restriction digest; Restriction map; Software; Bacterial artificial chromosome; Genetics; Fingerprint (computing); DNA profiling; DNA; Computer science; Artificial intelligence; Polymerase chain reaction; Algorithm; Gene; Base sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004728634,0.004124178,0.002446899,0.006427244,0.001048915,0.002314425,0.003973121,0.001188364,0.04872531],"category_scores_gemma":[0.01200288,0.002219655,0.002085439,0.003266499,0.0007399798,0.002666475,0.002767927,0.003193978,0.03706388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009330537,"about_ca_system_score_gemma":0.001690366,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002004729,"about_ca_topic_score_gemma":0.001767235,"domain_scores_codex":[0.996339,0.0005086775,0.0007252775,0.0007164396,0.001472637,0.0002380493],"domain_scores_gemma":[0.9928434,0.003180128,0.0006451716,0.001203312,0.001870055,0.0002578567],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0009951566,0.0004004708,0.002996653,0.003468808,0.0005547233,0.0007346556,0.000629069,0.01173253,0.06155929,0.009271059,0.2503453,0.6573123],"study_design_scores_gemma":[0.0007319393,0.0003531566,0.01029934,0.00115297,0.000409437,0.002814501,0.0002713661,0.1919585,0.1224717,0.04232959,0.6264848,0.0007226052],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.001560106,0.0004479685,0.7050436,0.00009425513,0.0001431479,0.0005934483,0.009482016,0.2792913,0.003344126],"genre_scores_gemma":[0.008019839,0.0006198268,0.9312392,0.0002242854,0.0000691693,0.00344179,0.02119182,0.02915226,0.006041854],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.04872531,"threshold_uncertainty_score":0.1630024,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04586154721941497,"score_gpt":0.3938830017010043,"score_spread":0.3480214544815893,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}