{"id":"W2107317000","doi":"10.1099/00221287-148-8-2541","title":"Protein signatures distinctive of chlamydial species: horizontal transfers of cell wall biosynthesis genes glmU from archaea to chlamydiae and murA between chlamydiae and Streptomyces a aThe GenBank accession numbers for the sequences reported in this paper are indicated in the text.","year":2002,"lang":"en","type":"article","venue":"Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"McMaster University","keywords":"Chlamydiae; Biology; Chlamydophila; GenBank; Chlamydophila pneumoniae; Chlamydiaceae; Gene; Microbiology; Genetics; Virology; Bacteria; Chlamydia","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001150364,0.0002634367,0.0002451557,0.0006863314,0.0002905697,0.000336398,0.0001825684,0.0003770539,0.001070593],"category_scores_gemma":[0.0005349584,0.0001918697,0.0003000343,0.0007285713,0.0002200121,0.0001376657,0.0003934306,0.0003963583,0.0003954928],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002367747,"about_ca_system_score_gemma":0.0002751941,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001453488,"about_ca_topic_score_gemma":0.002310616,"domain_scores_codex":[0.999845,0.00001196317,0.00001223649,0.00005292925,0.00003294605,0.00004491855],"domain_scores_gemma":[0.9995659,0.00009651088,0.0001605931,0.00004513067,0.00004544943,0.00008640247],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003337737,0.00002740504,0.0147197,0.0001346404,0.00002081335,0.0002558637,0.0001682355,0.00004391755,0.980302,0.00006201252,0.00006913175,0.003862571],"study_design_scores_gemma":[0.00002553451,0.0004090158,0.8025331,0.00007412908,0.0001273912,0.002734729,0.0005146776,0.0006555176,0.1882006,0.0001366559,0.004560762,0.00002774802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974563,0.0003914427,0.0005732633,0.00002079566,0.00001098495,0.00001311712,0.0009384134,0.00002488136,0.0005710278],"genre_scores_gemma":[0.9936733,0.0002841864,0.002645625,0.00006129302,0.00000702609,0.00002194583,0.002558361,0.00001248822,0.0007357892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001453488,"threshold_uncertainty_score":0.003581464,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0284796217823927,"score_gpt":0.2593440098257929,"score_spread":0.2308643880434002,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}