{"id":"W2107426021","doi":"10.1073/pnas.0806554105","title":"Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts","year":2008,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":111,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Stockholms Universitet; Knut och Alice Wallenbergs Stiftelse; Artdatabanken, Sveriges Lantbruksuniversitet; Stiftelsen för Strategisk Forskning; University College Cork; European Commission; National Institutes of Health; Vetenskapsrådet; National Science Foundation","keywords":"Biology; Gene; Genome; Genetics; Frameshift mutation; Bacterial genome size; Pseudogene; Population; Phenotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005507758,0.0001004118,0.0001484768,0.00002398177,0.0007168784,0.00002507043,0.000365053,0.00008699519,0.00006441165],"category_scores_gemma":[0.0001797575,0.00003613767,0.0000757594,0.0004840915,0.0008734885,0.0003768647,0.0001228986,0.00008407061,0.000001358675],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002310754,"about_ca_system_score_gemma":0.000009884518,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001785957,"about_ca_topic_score_gemma":0.000002129671,"domain_scores_codex":[0.998631,0.00001135966,0.0003120709,0.0002451677,0.0006282151,0.0001721778],"domain_scores_gemma":[0.9993701,0.0001108349,0.0003018892,0.000003951435,0.0001531286,0.00006012398],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000296653,0.00004440921,0.01842348,0.000004532605,0.00000525024,1.22897e-8,0.00007020085,2.179031e-7,0.9795597,0.0003413182,0.001109162,0.0004120398],"study_design_scores_gemma":[0.00007586434,0.00009425748,0.3655534,0.00001125812,0.00000504309,0.0000409365,0.00007416624,0.00001373534,0.6327513,0.0009699548,0.0003406641,0.00006933278],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947194,0.000375185,1.209126e-8,0.003820647,0.00002346461,0.000119678,0.0001141362,0.00001355849,0.0008139012],"genre_scores_gemma":[0.9992027,0.00006799701,0.00004864044,0.0003985841,0.00009629786,0.000006422779,0.000001240015,4.472125e-7,0.0001776686],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3471299,"threshold_uncertainty_score":0.5513722,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0431112871279028,"score_gpt":0.2490542724566187,"score_spread":0.2059429853287159,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}